Gene Shewana3_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2999 
Symbol 
ID4478542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3604335 
End bp3605840 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content51% 
IMG OID639727603 
Productpeptidase M32, carboxypeptidase Taq metallopeptidase 
Protein accessionYP_870630 
Protein GI117921438 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2317] Zn-dependent carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG CTATGAACGC CAAAGAACCT ACGCCAAGTT ACGATAAACT CACGGCCCAT 
TTCCAGAGAA TTTCACATTT TGAACATTTT AGTGCGCTAG GTGATTGGGA TCAGGCCGCC
ATGATGCCCC TCGGTGGCGG CAGTGAACGG GGCGATGCCA TGGCAGAGCT GGCGTTACAT
ATCCATAGCC TTAAAACGGC GCCAGAGCTT GGCGATAACC TCGCACAAGC CTCGCAAGAG
GCGCTGAGCC CAGAACAACA GGCCAATCTG AGGGAAATGC AATATCAGTA TCAACAGGCG
ACCTTAGTGC CGGGAGAGTT GGTACAGGCC AAAACCAAAA TGGCCTACCA GTGTGAAAAT
GCCTGGCGTG AACAACGCAA AAACAATGAT TGGCAAGGTT TTAAACCAAA TCTAAAAGCA
GTGATCTCCC TCGCGAGGGA AGAAGCCTTA ATTCGCGCGC AGGCGCTTAA CATCTCCCCC
TACGATGCCC TGCTCGATAA ATTTGAGCCC GGCATGACCA CGGCAAAGCT CGAACAAACC
TTTGGCGACT TGAAGACTTG GTTACCCTCT CTTATTCAAG ATGTGCAGGC AAAACAAGCC
AGTGAACCCA AGCTTCCCCT TAACGGCCCC TTCGAAATCA AGGCACAGCA AGCCCTCGGC
CAAGCGGTGA TGGCCTATTT AGGGTTTGAT TTTAACCATG GCAGGCTCGA TATCAGCAGC
CACCCATTTT GTGGTGGAGT GCCCAGCGAT GTGCGCATCA CGACGCGTTA TAATGAAGCC
GATTTTAGCA GCGCTATCAT GGGCATAGTG CATGAAACTG GTCATGCCCG TTATGAACAG
GGCTTACCGA AATCATGGCG CGGTCAGCCC GCAGGATTGG CTCGCTCCAT GGGCGTCCAT
GAGAGCCAAA GCTTATTTTG TGAAATGCAG CTCGGGGCCA ATCCCGCGTT TTTACGCCAA
CTGCAACCAC TGATTAAACA GCATTTGGGC TGCGAGTTCA GCGCCCAAGA CTTGGCAAGA
CACTATACCC GCGTCAATCC GGGGCTTATC CGTGTCGATG CCGATGAAGT CACTTACCCT
TGTCACATTC TATTGCGCTT TGAGGCCGAA AAAGCCTTTA TCGACGGCAG TCTGAGCGTG
GATGACCTCC CCGATTTTTG GTCAAGCCAG ATGCAACAAC TGCTTGGGAT CAATACCGAT
GGTAACTATC GCGATGGTTG TATGCAGGAT ATCCATTGGG CCGTGGGTGA ATTGGGATAT
TTCCCAAGTT ATACCTTAGG CGCCATGTAT GCCGCCCAAT GCCGTTTTGC GCTGGAGCGA
AGCTTAGGCC CGATTGAAAA TCTCATCGAT AACGGCCAGT TATCCCAAGT ATTTGACTGG
CTTGGCAGCC ATATTTGGTC CAAAGGTTCA TTACTGACAA CGGATGAGCT CATCATTCAA
GCCACAGGCG AGCCGCTCAA TAGCCAATAT CTTGCTAAAC ACTTGAAGCA ACGTTATTTG
GGTTAA
 
Protein sequence
MDTAMNAKEP TPSYDKLTAH FQRISHFEHF SALGDWDQAA MMPLGGGSER GDAMAELALH 
IHSLKTAPEL GDNLAQASQE ALSPEQQANL REMQYQYQQA TLVPGELVQA KTKMAYQCEN
AWREQRKNND WQGFKPNLKA VISLAREEAL IRAQALNISP YDALLDKFEP GMTTAKLEQT
FGDLKTWLPS LIQDVQAKQA SEPKLPLNGP FEIKAQQALG QAVMAYLGFD FNHGRLDISS
HPFCGGVPSD VRITTRYNEA DFSSAIMGIV HETGHARYEQ GLPKSWRGQP AGLARSMGVH
ESQSLFCEMQ LGANPAFLRQ LQPLIKQHLG CEFSAQDLAR HYTRVNPGLI RVDADEVTYP
CHILLRFEAE KAFIDGSLSV DDLPDFWSSQ MQQLLGINTD GNYRDGCMQD IHWAVGELGY
FPSYTLGAMY AAQCRFALER SLGPIENLID NGQLSQVFDW LGSHIWSKGS LLTTDELIIQ
ATGEPLNSQY LAKHLKQRYL G