Gene Shewana3_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2996 
Symbol 
ID4478539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3601129 
End bp3602907 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content50% 
IMG OID639727600 
Productband 7 protein 
Protein accessionYP_870627 
Protein GI117921435 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGT TAAATGATGT AACCAGTTCG AGCAACTTCG TGTTGTTAGT TGCCGGAATG 
GTATTGGTTG GCCTGATTGT GATTGGTCTG ATTTTCGCCA AATTATATAA ACGTGCGACG
AAGGAAATGG CCTTTGTTCG TACGGGTTTT GGCGGTGAAA AAATTATTAA GGACGGCGGC
GCAATCGTCT TACCCGTGCT GCATGAAACC ATAGCCGTAA ATATGAATAC CCTGCGTATC
GAAGTGGAGA AAACTCAAAA AGATGCGCTG ATCACTAAGG ATAGAATGCG CGTCGATGTG
AAGGCCGACT TCTATCTGCG TGTGGCGCCC AATGCTGAAG GCATTTCAAT GGCGGCACAA
ACCTTAGGTA CCCGTACCAC GCGCGTGGAA GAGCTGAAAA AGCTGATGGA ATCTAAGTTT
GTTGACGTGT TACGTGCGGT CGCGGCGGAA ATGACCATGA CCGAAATGCA TGAGCAGCGC
GCCGATTTTG TCCAGCGGGT GCAGAATAAC GTCGCTAACG ATCTCGAGAA AAACGGGCTA
GAGCTCGAAT CCGTTTCTTT GACGGGTTTT GACCAGACTG ATCTGCAATT CTTTAATGAA
AATAACGCAT TCGACGCTGA AGGTCGTGCA CGTTTAGCCA AGATTATCGA AGAAAAACGT
AAAGAAACCA ACGATATCCA GCAGGAAAAC CGCATCAAGA TCGAGCAGCG TAACCTAGAG
GCTGAAAAAG AATCGCTAGA GATTGAAAAG GCCGAAGAAG AAGCGCGTCT GGTGCAGCAA
CAGTCGCTCG AATTTAAGCG TGCCGAGCAA AAAGCGGAAA TTATTAAGCA AAAAGAAAAC
AAGTCCCGTG AAGAACGCGA AGCTGAAATT GCCAAAGAGC GTGCAATCGA AACAGCGGAA
ATCGAAAAGA CCAAAGACAT CGAAACCCGC GAGATTGAAA AGCGCAAATC CATCGAACAG
GCACGTATTC AACAGCAACG TGATATCGAA GTCGCAGAGC AGGAAAAACA CATCGCGGTA
GCCGCGAAGT CGGAAGAAGA GTCTGCCGCC CGTGCCCGCG CCGCCGAAGC GGAAAAAACC
AAGGTAGAGA AAGAAGAAGC GGTTATTACG GTGCGCCAAG TGGCTGAGGC GAATCGTCGT
AAAGAGATTG AAGTGATCGA TGCGCGCAAA GAAGCGGAGC GCGATGCAGT GGGCGTGACA
GTGCAAGCCG AGGCGGAAAA ACGTGCCGCC GAAGACAGAT CGAGCGCGAT TCTGATTGAA
GCCCGTGCCA GTGCCGATGC CAAAAAACTG CAAGCCGAGG CCGACGAGAA GGTCTATGCG
GTAGAAGCGG CGGGTAAACA AGCTCTGTAC GAAGCCGAAA ACGTGCTGCG TGATGAGCAG
ATTGCGCTGC AAAAATCCCT CGCTATCTTA AAAGCACTGC CAGAGATTGT CGCGCAGGCG
GTTAAACCGC TGGAAAACAT TGAAGGTATT AAAATTCTTC AAGGTTATGG CGCCGGTAAT
CAACTGGCAT CGGGAGCAGA TGGCGCTGTC GCGCATCAAG GCGGTATCGC CGAGCAAGTG
ACCAGCGCCG CGTTAAACTA CCGCGCTAAT GCGCCAGTGG TGGATGCCAT GCTGCGGGAG
TTGGGCTTAG TGCAATCTGA GTCTGGCACC TTAAACGACC TGCTCAATGG CAATAATGCT
TTAACTACCG AAGCCTTAAA TGTTGTGAAG TCGGCGAATA GCGGATTAAA TGGTTATAGC
CAGCAACATA CAGTGATAGA GCCAAAGATA AGTAATTGA
 
Protein sequence
MDVLNDVTSS SNFVLLVAGM VLVGLIVIGL IFAKLYKRAT KEMAFVRTGF GGEKIIKDGG 
AIVLPVLHET IAVNMNTLRI EVEKTQKDAL ITKDRMRVDV KADFYLRVAP NAEGISMAAQ
TLGTRTTRVE ELKKLMESKF VDVLRAVAAE MTMTEMHEQR ADFVQRVQNN VANDLEKNGL
ELESVSLTGF DQTDLQFFNE NNAFDAEGRA RLAKIIEEKR KETNDIQQEN RIKIEQRNLE
AEKESLEIEK AEEEARLVQQ QSLEFKRAEQ KAEIIKQKEN KSREEREAEI AKERAIETAE
IEKTKDIETR EIEKRKSIEQ ARIQQQRDIE VAEQEKHIAV AAKSEEESAA RARAAEAEKT
KVEKEEAVIT VRQVAEANRR KEIEVIDARK EAERDAVGVT VQAEAEKRAA EDRSSAILIE
ARASADAKKL QAEADEKVYA VEAAGKQALY EAENVLRDEQ IALQKSLAIL KALPEIVAQA
VKPLENIEGI KILQGYGAGN QLASGADGAV AHQGGIAEQV TSAALNYRAN APVVDAMLRE
LGLVQSESGT LNDLLNGNNA LTTEALNVVK SANSGLNGYS QQHTVIEPKI SN