Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2995 |
Symbol | |
ID | 4478538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3600412 |
End bp | 3600972 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639727599 |
Product | PfpI family intracellular peptidase |
Protein accession | YP_870626 |
Protein GI | 117921434 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTA TTTTGATCAT CGCCGGTGAT TTTGTTGAAG ATTATGAGCT AATGGTACCG TTCCAAGCCC TACAAATGGT GGGGCACAGC GTAACGGTTG TCTGCCCTGA TAAAGTGGCG GGACAAACCA TTAAAACGGC TATCCATGAC TTTGAAGGCG ATCAAACCTA TACCGAAAAA CCAGGACACT TATTTGCCCT AAATGGCAAC TTTGCCGGTA CCAACGCCAG TGATTTTGAT GCGCTGCTGC TTCCCGGTGG CCGTGCGCCT GAGTATTTAC GCCTAAATCC TGCGGTGATC GCCTTGGTGA TGGACTTTGC TGCCCAAGAT AAACCCATAG CGGCGATTTG CCATGGCGCG CAGTTACTGA CGGCGGCCGA TGTGGTACGC GGTAAGAAAG TGTCTGCCTA TCCAGCTTGT GCGCCTGAGG TGAAACAAGC GGGCGCCGAG TATTGCGAGA TTGAGGTGAC GGCGGCAATC ACCGATGGCA AGTTAGTCAC GGCGCCCGCC TGGCCAGCGC ATCCTGCATG GTTGGCGCAG TTTAACAAGT TATTGAATTA A
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Protein sequence | MASILIIAGD FVEDYELMVP FQALQMVGHS VTVVCPDKVA GQTIKTAIHD FEGDQTYTEK PGHLFALNGN FAGTNASDFD ALLLPGGRAP EYLRLNPAVI ALVMDFAAQD KPIAAICHGA QLLTAADVVR GKKVSAYPAC APEVKQAGAE YCEIEVTAAI TDGKLVTAPA WPAHPAWLAQ FNKLLN
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