Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2991 |
Symbol | |
ID | 4478534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3597334 |
End bp | 3597981 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727595 |
Product | redoxin domain-containing protein |
Protein accession | YP_870622 |
Protein GI | 117921430 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCCC TACTACAGCG CTTTTTACTG ACCACCAGCC TATTGCTCGG CAGTTTTAGT ACGTTAGCTC AACCTATCGC CAAGGATGAA TATTCGGTGA GTCCATTGCT CAATGGCGAG CAAATCCCCG CAATCACTTT GCAAGACATG AATGGTCAAA GCGTTGATTT AGCGAAATTA ACAGCACAAA AGCCAACCAT TTTCTTCTTT TACCGTGGCG GCTGGTGTCC GTTTTGCAAC AACCAAATGG GCCAGCTCAA AGCCATCGAA CCTAAACTTA TCGACATGGG CTTTCAATTG GTGGGGATTT CACCCGATAC ACCTGCACAG CTAAAGGCAT CAGCGGCTAA AAACGAGCTC AAATATCAAC TGCTTTCCGA TGAAAAAATG CAGGCAGCGC AAGCCTTTGG TCTTGCCTTT TACACCAGTA AACAAGTGAC TGATACTTAC CTGAGTCGCT TAAATCTGGA TAACCCACTG TGGACAACGC CCGAAGGCGA TAAACGCTTA GTTCTGCCTG TTCCGGCAAT TTATATCGCT GACACTCAAG GATTAATCCA TTTCCAATAT GTAAATCCCA ACTATAAGGT GAGACCCGCA CCTAAGTTGA TTCTGACCGC CGCCAGCCTC GTCGGAGCAC CAGAATAA
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Protein sequence | MQSLLQRFLL TTSLLLGSFS TLAQPIAKDE YSVSPLLNGE QIPAITLQDM NGQSVDLAKL TAQKPTIFFF YRGGWCPFCN NQMGQLKAIE PKLIDMGFQL VGISPDTPAQ LKASAAKNEL KYQLLSDEKM QAAQAFGLAF YTSKQVTDTY LSRLNLDNPL WTTPEGDKRL VLPVPAIYIA DTQGLIHFQY VNPNYKVRPA PKLILTAASL VGAPE
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