Gene Shewana3_2991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2991 
Symbol 
ID4478534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3597334 
End bp3597981 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content47% 
IMG OID639727595 
Productredoxin domain-containing protein 
Protein accessionYP_870622 
Protein GI117921430 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCC TACTACAGCG CTTTTTACTG ACCACCAGCC TATTGCTCGG CAGTTTTAGT 
ACGTTAGCTC AACCTATCGC CAAGGATGAA TATTCGGTGA GTCCATTGCT CAATGGCGAG
CAAATCCCCG CAATCACTTT GCAAGACATG AATGGTCAAA GCGTTGATTT AGCGAAATTA
ACAGCACAAA AGCCAACCAT TTTCTTCTTT TACCGTGGCG GCTGGTGTCC GTTTTGCAAC
AACCAAATGG GCCAGCTCAA AGCCATCGAA CCTAAACTTA TCGACATGGG CTTTCAATTG
GTGGGGATTT CACCCGATAC ACCTGCACAG CTAAAGGCAT CAGCGGCTAA AAACGAGCTC
AAATATCAAC TGCTTTCCGA TGAAAAAATG CAGGCAGCGC AAGCCTTTGG TCTTGCCTTT
TACACCAGTA AACAAGTGAC TGATACTTAC CTGAGTCGCT TAAATCTGGA TAACCCACTG
TGGACAACGC CCGAAGGCGA TAAACGCTTA GTTCTGCCTG TTCCGGCAAT TTATATCGCT
GACACTCAAG GATTAATCCA TTTCCAATAT GTAAATCCCA ACTATAAGGT GAGACCCGCA
CCTAAGTTGA TTCTGACCGC CGCCAGCCTC GTCGGAGCAC CAGAATAA
 
Protein sequence
MQSLLQRFLL TTSLLLGSFS TLAQPIAKDE YSVSPLLNGE QIPAITLQDM NGQSVDLAKL 
TAQKPTIFFF YRGGWCPFCN NQMGQLKAIE PKLIDMGFQL VGISPDTPAQ LKASAAKNEL
KYQLLSDEKM QAAQAFGLAF YTSKQVTDTY LSRLNLDNPL WTTPEGDKRL VLPVPAIYIA
DTQGLIHFQY VNPNYKVRPA PKLILTAASL VGAPE