Gene Shewana3_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2989 
Symbol 
ID4478532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3594549 
End bp3595844 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content48% 
IMG OID639727593 
Producthypothetical protein 
Protein accessionYP_870620 
Protein GI117921428 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TACTGTTTCC CCTCGCTGCA ATCATGGCGA GCCAAGTCGT TTTTGCACAA 
TCTATTTCGG ATAAAAATGC TCAGGATGCA TTTATCTATG GTTACTCGAT AGATGAAGCC
TATAAATTTT TCTACGAAAC CGCAGTTAAA ACCGATACTC CACTGAACCG CTTCCAAAAT
ATTCGTCACA TTGCCGACGA TACCTACACA GCGCACCCCA CCATTAACAA CGATACCCTG
CACTTAATGG GGTGGTTGGA CGTGGCCGCT GAGCCTGTGA TCGTGAGCGT GCCCGATATG
GATAAAGGAC GTTATTGGAT CCTCCATACT ATGGATATGG GCCATTACAC CACCTCCATG
GTTGGCTCTC GTTTAAGGGG CAATGAGGGC GGCCACTTTA TGTTTGCCGC CCGTTCATGG
AAAGGCGATG TGCCAGCCAG TGTGGACGAA GTGATTTATG TGGATTCGAA TCTGATCAAG
CTGATGGGCC GCATTATGGC CGTTGGCAAG GAAGATGAGA AAGTCGCGTT AAATTATATG
GATGATTGGA ATATCCGCAC TTTGTCTGCC TATCTTGGTG TGGCTGGCCC GAAACCTAAG
GAGCGCACTT ACCCCGATCC CGAGAAGAGC AATTGGCTGC AACGGGTCAA CTATATGCTC
TGCGATGGCG ACATGGGCAC GGCCGATAAG CAATGGTTAG ATCTGTTTAA GGATATTGGT
CTGGTGCCTT GTAAGGAAGA CTTAACGGCC GCTCAAATCG CTGCCGCTAA GGTTGGCGAA
ACGTTAGGGA TGAAACACAT TATCGAGTTA GCGCCAAAAA TGACCAATGC GGGTAAGTTA
TTAGGTACCC GTGAGCAGTT GAGTGATGGT GCGCGCGATC TTTTCGCCGA AGGCACTTAC
CTTGGTCAGT GGGGATTGCC GCCCGATGAG TCCGTTTATC TGAAGGAGGA AAAGGGCGAT
GACGGTAAAA ATCTCAATGG CTCAAATGGC AAAAAATACC TGATGCACTT TAAGGCGCCC
GAGGTGAGTC AATTCTGGTC GTTTACTGTG TATGGATCGG ATAATCGTTT AATGGCGCAC
AATGAGATTA ACCGCCACAG CCGCGGCGAT CGTACTCTTA AACCCGGCGC CGATGGCATG
TATACCATCG AATTGAGCGC TAAAGGGGAT GAGAGCAACA GCAATTGGCT GCCGATTCCT
GAAAAGGATG CCTACATTAT TATGCGCATG TACGGCCCTA ATAAGGAAAT CCAAGAGGGC
AAGTATCCTT TCCCTAAAAT TCAAGTGGTT AAGTGA
 
Protein sequence
MKKVLFPLAA IMASQVVFAQ SISDKNAQDA FIYGYSIDEA YKFFYETAVK TDTPLNRFQN 
IRHIADDTYT AHPTINNDTL HLMGWLDVAA EPVIVSVPDM DKGRYWILHT MDMGHYTTSM
VGSRLRGNEG GHFMFAARSW KGDVPASVDE VIYVDSNLIK LMGRIMAVGK EDEKVALNYM
DDWNIRTLSA YLGVAGPKPK ERTYPDPEKS NWLQRVNYML CDGDMGTADK QWLDLFKDIG
LVPCKEDLTA AQIAAAKVGE TLGMKHIIEL APKMTNAGKL LGTREQLSDG ARDLFAEGTY
LGQWGLPPDE SVYLKEEKGD DGKNLNGSNG KKYLMHFKAP EVSQFWSFTV YGSDNRLMAH
NEINRHSRGD RTLKPGADGM YTIELSAKGD ESNSNWLPIP EKDAYIIMRM YGPNKEIQEG
KYPFPKIQVV K