| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2988 |
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| Symbol | |
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| ID | 4478531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3593167 |
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| End bp | 3594468 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727592 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_870619 |
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| Protein GI | 117921427 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTGCCCC GAGATTTTAC GCGCTATCTC AGATTGCGGT
TATCAAAAAA TGACACCTAT TCAGCAGCAA GCGATCCCCG CTATCCGCCG CGGGCAAGAT
GTGCTGGCTA GCGCGCAAAC AGGTACGGGC AAAACGGCGG CCTTCGCCCT GCCGATACTG
CAAAAGATGG TAGAAAACCC TAGCGAGACC CTAAAATCGA ACGCGCGGGT ATTAATCCTC
ACGCCGACTC GTGAGCTCGC AGCTCAAGTC GCCGACAACG TTGAAGCCTA CAGCAAGTAT
TTAAATTTCA GTGTATTAAC CATTTACGGT GGTGTAAAGG TTGAGACTCA GGCGCAAAAG
CTTAAGCGCG GTGCCGATAT TATTGTCGCG ACGCCGGGGC GCTTACTCGA ACACCTGACC
GCCTGTAATT TAAGCCTCTC TAGCATCGAT TTTTTAGTGC TCGATGAAGC CGACCGTATG
TTAGACATGG GCTTTAATGC GGATATTCAA AAAATCCTTC AAGCGGTGAA TAAGAAGCGT
CAAAACCTAT TATTCTCAGC TACCTTCTCA AGTGCGGTGA AAAAACTGGC CAACGACATG
ATGGTCAAAC CTCAGGTGAT CAGCGCCGAT AAGCAAAACA CCACCGCCGA TACCGTGAGC
CAAGTGGTGT ATCCGGTGGA GCAGCGCCGT AAGCGCGAAC TCTTATCCGA ACTGATTGGT
AAGAAGAACT GGCAACAAGT GTTGGTCTTT ACCGCGACGC GCGATGCGGC CGACACCTTA
GTGAAAGAAT TGAATTTAGA TGGAATTCCC TCTGAAGTCG TCCACGGTGA AAAGGCACAA
GGTAGCCGTC GCCGCGCGCT GCGTGAGTTT GTCTCAGGCA AAGTGCGCGT ATTAGTCGCC
ACTGAAGTCG CCGCCCGCGG CTTAGACATT CCAAGCCTTG AGTATGTAGT CAACTTCGAC
TTACCTTTCC TTGCCGAAGA CTATGTGCAC CGTATTGGTC GTACCGGTCG CGCGGGTAAG
TCAGGGGTTG CGATTTCATT TGTGAGCCGT GAAGAAGAGC GCACACTCGC TGATATTGAA
AAGCTAATCG GCCAAAAAAT TCGTCGTATT ACCGTGCCAG GATACGAAGT CGGTAGCCGC
GACTTGCTGT TAAAGCAGCT ACAAACCCGT CGTAGTTTTG CCAAGAAACA ACAGCGACTC
GACAACGTTA GCGAGCAGAT CATCGCCGAG AAAAGCATGC AGGGCCGCCG CGTGAAGATG
AAGGTTGGCC AAGCCCCAAG TAAGGCGAAA AAACTTAAGT AA
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| Protein sequence | MRFESFSFCP EILRAISDCG YQKMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL
QKMVENPSET LKSNARVLIL TPTRELAAQV ADNVEAYSKY LNFSVLTIYG GVKVETQAQK
LKRGADIIVA TPGRLLEHLT ACNLSLSSID FLVLDEADRM LDMGFNADIQ KILQAVNKKR
QNLLFSATFS SAVKKLANDM MVKPQVISAD KQNTTADTVS QVVYPVEQRR KRELLSELIG
KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGEKAQ GSRRRALREF VSGKVRVLVA
TEVAARGLDI PSLEYVVNFD LPFLAEDYVH RIGRTGRAGK SGVAISFVSR EEERTLADIE
KLIGQKIRRI TVPGYEVGSR DLLLKQLQTR RSFAKKQQRL DNVSEQIIAE KSMQGRRVKM
KVGQAPSKAK KLK
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