Gene Shewana3_2986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2986 
Symbol 
ID4478529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3588962 
End bp3590776 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content52% 
IMG OID639727590 
Productpeptidase M24 
Protein accessionYP_870617 
Protein GI117921425 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAG AATCGTCATC ATCCCAACAA CCTAATAAGA TTGCTAACCG TCTCGCCGCC 
ATTCGTAGTG AACTCGCCAG TGCCAATTTA GATGCCTTTA TCATCCCGCG CGCGGATGAA
TACTTGGGCG AATATGTGCC TGAGCATAAC GAGCGTCTGT ACTGGGCAAC CGATTTTACT
GGCTCAGCAG GCATGGCCAT TGTCTTAAAA GACAAAGCCG CCATCTTCAC CGATGGTCGT
TATACGGTAC AAGTTCGCTT ACAGGTGGAT GCAAATCTGT TTAGTTATGA AAGCCTGACC
GACACACCAC AAATCGAATG GCTATGCGAT ACGCTTGCCG CAGGTTCACG TGTGGGCTTC
GATGCCCGTT TACACACATT AGCGTGGTTT GAAAACGCCA AAGCGATGTT AGCGAAGGCT
CAAATTGAAC TGGTTGCCGT CGAACAGAAT CCGATTGATA AACACTGGCA AAACCGACCT
GCACCATCGA GTGCAGCAAT CACGTTATTT AGTAATGAGA GTGCGGGTAA AACCAGCCTG
CAAAAACGCA CAGAGATTGG CGCATTAGTC AAAAAAGCCG GCGCCGATGT CGCGCTGATC
GCCGCTTTGG ACTCCTTCTG CTGGCTACTC AATATCCGTG GTAATGACGT GCCGCGTCTG
CCGGTCGTAC TCGGCTGCGC GCTACTTCAC GCCAATGGCG ATATGCAGCT ATTTACCGAT
TTGAGCAAAC TCCCTGAAGG CATTGAGGAA CACGTTGGAG CGGGTGTGAG CTTTAAGAGC
GAAGCTGCAC TTGCCGATAC CTTGGCAAGC TTACAGGGCG TGAAACTGCT CGCCGATCCG
AACTCTGCCA ACGCTTGGGC ACAAAATATC GCCCGCGATG CTGGCGCTAA GTTAATCGCC
GGTATCGACC CCGTATCACT GCCTAAGGCA CAGAAGAATG CCGCCGAATT AGCAGGCATG
CGCGCCAGCC ATATCCGTGA TGGTGTCGCC GTGAGCCGTT TCCTCGCTTG GCTCGATGCC
GAAGTCGCCG CCAATCGTCT GCACGATGAA GCAACCCTCG CCGATAAGTT AGAAAGCTTC
CGCCTAGAAG ATCCACAATA TCGCGAGCCA AGTTTCGATA CCATTTCCGC CGCAGGCGCC
AATGCGGCCA TGTGCCACTA CAACCATAAC AATGGCACGC CTGCCATGAT GACGATGGAC
AGCATCTATC TTGTGGATTC TGGCGCTCAG TATCTGGACG GCACCACGGA TGTCACTCGC
ACCATCGCCA TTGGTAAAGT GACCGATGAA CAGAAGAAAA TGGTCACCTT GGTATTGAAA
GGCCATATCG CCTTAGATCA GGCTCGCTAT CCGAAAGGCA CAACGGGGCA ACAACTCGAT
GCCTTCGCCC GCCAATATCT GTGGCAACAT GGGTTTGATT ACGACCACGG CACAGGCCAC
GGAGTTGGTC ATTTCCTCAG CGTGCACGAA GGCCCGCAGC GCATCGGTAA AAATCTCAAT
GCCATCGCCC TAATGCCTGG CATGGTGTTA TCCAACGAGC CAGGTTATTA CCGCGCCGAC
AGTTTTGGGA TCCGCTTAGA AAACCTAGTG GTAGTGCAAC ACTGCGAAGC CTTAAAGGGC
GCCGAGCGTG AAATGTATGA ATTTGATGCC TTAACGCTGA TCCCAATGGA TGCTCGCCTT
ATCGATAAGA GCCTGTTAAC CCAAGGCGAA ATCGACTGGT TTAATGCTTA CCATCAGAAA
GTGTTTAACA CCTTATCGCC ATTAATGTCG GGCAGTGAGC TTGAGTGGCT GACAAAGGTC
ACAAAAGCCA TCTAA
 
Protein sequence
MSLESSSSQQ PNKIANRLAA IRSELASANL DAFIIPRADE YLGEYVPEHN ERLYWATDFT 
GSAGMAIVLK DKAAIFTDGR YTVQVRLQVD ANLFSYESLT DTPQIEWLCD TLAAGSRVGF
DARLHTLAWF ENAKAMLAKA QIELVAVEQN PIDKHWQNRP APSSAAITLF SNESAGKTSL
QKRTEIGALV KKAGADVALI AALDSFCWLL NIRGNDVPRL PVVLGCALLH ANGDMQLFTD
LSKLPEGIEE HVGAGVSFKS EAALADTLAS LQGVKLLADP NSANAWAQNI ARDAGAKLIA
GIDPVSLPKA QKNAAELAGM RASHIRDGVA VSRFLAWLDA EVAANRLHDE ATLADKLESF
RLEDPQYREP SFDTISAAGA NAAMCHYNHN NGTPAMMTMD SIYLVDSGAQ YLDGTTDVTR
TIAIGKVTDE QKKMVTLVLK GHIALDQARY PKGTTGQQLD AFARQYLWQH GFDYDHGTGH
GVGHFLSVHE GPQRIGKNLN AIALMPGMVL SNEPGYYRAD SFGIRLENLV VVQHCEALKG
AEREMYEFDA LTLIPMDARL IDKSLLTQGE IDWFNAYHQK VFNTLSPLMS GSELEWLTKV
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