| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2982 |
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| Symbol | |
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| ID | 4478525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3582424 |
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| End bp | 3583752 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727586 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_870613 |
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| Protein GI | 117921421 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACCA AAGCGGCAAA ACCTCTGGTC AAACTCGTCG ACCGTTATTT ACCCGACCCT
TATATCTTTG TCTTGCTCTT AACCTTAGTG GTGTTGATTT CGGCCGTGGT GGCTGAGCAG
AAAACCCCAC TCGAAGTCAT CAATTACTGG GGCGATGGCT TTTGGGCACT GCTGAGTTTT
TCGATGCAGA TGCTATTAGT GCTGGTGGCG GGATTTATGC TCGCCAGCTC GCCACCGATT
AAGAAATTAC TCGATGGCAT CGCTGGATTC GCTAAGTCGG CGCCACAGGC GATTATCTTA
GTAACACTGG TTTCACTCGC CGCCAGTTGG ATTAACTGGG GATTTGGTTT AGTGGTCGGC
GCCTTATTCG CGAAGGCCTT AGCGCGTAAA GTGCGTGTGG ATTACCGTTT ATTGGTCGCC
AGTGCTTACT CGGGATTTGT GGTTTGGCAT GGCGGCTTAG CGGGCTCGAT TCCGCTAACC
ATTGCCACGG CGGGGCATTT CTCTGAATCA CAAATCGGCA TCATCCCCAC CAGCGAGACC
ATCTTCGCGA GCTTTAACCT GCTGTTAGTG CTGATTTTGT TTGTGGTGAT GCCTCTGGTA
AACCGCTTTA TGCTGCCCGA AGAGAAAGAC GGTATCTATG TCGATCCTAA GGCTCTTGAG
GATGGGGCCG CAGACGATAA CGCGGCGCAG TTAACGGCCA ATACGACTCG CCCTGCGGAT
AAATTAGAAA ACAGTCGCTT GCTCGGTTGG AGCGTGGGCG GCGCGGGACT CGTTTACTTA
GGCTACTACT TTGCTGTGCA GGGCGGCAGC TTAAACCTTA ACCTAGTCAA CTTCTTATTT
TTATTCCTCG CCATCGTGCT GCATCAAACG CCACGCAGTC TATTGCTGAG TCTCAACGAA
GCCATTAAAG GCGGCGCGGG TATCGTTATC CAGTTTCCTT TTTACGCAGG GATTATGGCG
GTGATGGTGC AATCGGGATT AGCCCAGAGT ATTTCCGAAG GTTTTGTGGC CATCGCCAGT
GCCGAAAGTC TGCCATTTTG GAGCTTTATC AGTGCCGGGA TTGTGAATAT TTTCGTGCCT
TCTGGGGGCG GACAATGGGC GGTGCAGGCG CCGATTATGT TGCCTGCGGC CGAAGCCTTG
GGCGCCGATG TGGCACGTGT TGCTATGGCC GTAGCTTGGG GAGATGCGTG GACCAATCTT
ATCCAGCCTT TCTGGGCGCT GCCTGTGCTG GCCATCGCCG GGTTAAAGGC GCGGGATATC
ATGGGGTTTT GTTTAATGCA GCTGCTGATA ACCGGGGTGA TTATCAGTAT CGCCCTAAGC
TGGTTTTAA
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| Protein sequence | MLTKAAKPLV KLVDRYLPDP YIFVLLLTLV VLISAVVAEQ KTPLEVINYW GDGFWALLSF
SMQMLLVLVA GFMLASSPPI KKLLDGIAGF AKSAPQAIIL VTLVSLAASW INWGFGLVVG
ALFAKALARK VRVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFSES QIGIIPTSET
IFASFNLLLV LILFVVMPLV NRFMLPEEKD GIYVDPKALE DGAADDNAAQ LTANTTRPAD
KLENSRLLGW SVGGAGLVYL GYYFAVQGGS LNLNLVNFLF LFLAIVLHQT PRSLLLSLNE
AIKGGAGIVI QFPFYAGIMA VMVQSGLAQS ISEGFVAIAS AESLPFWSFI SAGIVNIFVP
SGGGQWAVQA PIMLPAAEAL GADVARVAMA VAWGDAWTNL IQPFWALPVL AIAGLKARDI
MGFCLMQLLI TGVIISIALS WF
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