Gene Shewana3_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2977 
Symbol 
ID4478520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3578276 
End bp3578713 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content53% 
IMG OID639727581 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_870608 
Protein GI117921416 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAT TTTTACAGGC CGCGATTGAT GAGGCCAAAC AAGGACTCGC CGAAGGCGGT 
ATCCCCATTG GTTCAGTATT AGTGATCGAC GGGGAAATTG TCGCCCGCGG CCATAACAAA
CGCGTGCAGC AAGGCAGCGC CGTGCTGCAT GCCGAAATGG ATTGCCTCGA AAATGCCGGC
AGATTGACCG CCGCCGATTA CCAAAAGGCC ACGCTCTATT CAACCCTTTC CCCCTGCGAT
ATGTGTAGCG GCGCGATTTT ACTCTATGGC ATCCCTAAGG TGGTGGTCGG TGAAAATGTC
ACCTTTCAAG GGCCGGAAGC CTATGTGCAG TCCCGCGGAG TAGAGGTAAC AGTGGTGGAC
AATCACGAGT GCAAACAGTT GATGCACGAT TTTATCGCCG CCAAGCCACA ACTGTGGAAC
GAAGATATTG GTGAATAG
 
Protein sequence
MDEFLQAAID EAKQGLAEGG IPIGSVLVID GEIVARGHNK RVQQGSAVLH AEMDCLENAG 
RLTAADYQKA TLYSTLSPCD MCSGAILLYG IPKVVVGENV TFQGPEAYVQ SRGVEVTVVD
NHECKQLMHD FIAAKPQLWN EDIGE