Gene Shewana3_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2973 
Symbol 
ID4478516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3573958 
End bp3574638 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content49% 
IMG OID639727577 
ProductYheO domain-containing protein 
Protein accessionYP_870604 
Protein GI117921412 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTGC AAGACTTAAC CCAAAGCGAT CTGGATATAC TCAAGTCCAT CGAAAATATC 
GTCGATGGGA TTGCCGCCAT GTACGGCCAA CATACAGAGG TCGTGCTGCA CAGCTTAGAT
GCTAAGCACC CTTCGGTGAT CAAAATTGCC AATGGTCATG TCACTGGCCG TGAGGTCGGT
GCGCCCATCA CTAACTTGGC CTTGCTTAAG CTCAAAACGG GTCAAGATAT TTCTAACTCT
TATCTTACCA AGTGCGCCAA CGGTAAGACC TTACGTTCGA TAACCACAGT TATCCGTAAT
CCTAAAAACC TGCCGATTGG GTTACTGTGC ATCAATACCG ATATGGATGC GCCGCTGCAA
TCTGTGCTGC GCACTATGAT GCCGGAGCAG CTCCTTGGCA GTGAATTGAC CAGTTCGCCC
GAGGTGTTTG CGCGCAATAT TGATGAGGCG CTGCACAGCA CTATCGATAG TGTTAACCAC
GAGGTGCGTG CCAATCCTGC GATTTCCCCT TCACAAAAGA GCCGCGAAAT TGTCAATCAA
CTCCATGAGT TAGGGATTTT CGAACTCAAG GATAGCGCCC AAGTGGCCGC CACTCGATTA
GGGATTTCAG TGCATTCCAT TTACCGCTAT TTGCGTGAAA TTAAAGCCAA TCAGGCGGAA
AGCGACAAAA GCCTCGCTTA A
 
Protein sequence
MKLQDLTQSD LDILKSIENI VDGIAAMYGQ HTEVVLHSLD AKHPSVIKIA NGHVTGREVG 
APITNLALLK LKTGQDISNS YLTKCANGKT LRSITTVIRN PKNLPIGLLC INTDMDAPLQ
SVLRTMMPEQ LLGSELTSSP EVFARNIDEA LHSTIDSVNH EVRANPAISP SQKSREIVNQ
LHELGIFELK DSAQVAATRL GISVHSIYRY LREIKANQAE SDKSLA