Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2972 |
Symbol | |
ID | 4478180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3572642 |
End bp | 3573916 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727576 |
Product | hypothetical protein |
Protein accession | YP_870603 |
Protein GI | 117921411 |
COG category | [S] Function unknown |
COG ID | [COG3681] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTC TATGGCAGCA ATACATTCAG ATCATTAACC AAGTGGTTAA ACCCGCCTTA GGCTGTACCG AGCCGATCGC CGCGGCCTAT GCGGCAGCCG TAGCACGCAC CTTATTACCG GTAGCACCCG AGTCAATTGC GGTGCAAGTT TCTGATAACT TGTATAAAAA CTCGATGGGT GTTTATGTGC CCGGTACAGG TAAAATCGGT CTCGCTATCG CCGCAGCCGC AGGCGCGCTT GCAGGTAATG CCGATGCGGG ATTAGAAGTC TTGGCCAACG TGACGCCTGA ACAAGTGGCA CAGGCACAAA CCCTTATCGA TGCGGGTAAA GTGAAGGTTG AGCGTACCGA GACCGACGAA TTTATCTATT GCTGCGTCAG CTTAACCGCT GGCGAGCAAG AGGCCATGGT GAAAATCTGT GGCGGCCATA CCTTGATTGC CGAGAAGCGC TTAAATGGTG AGTTAGTATT TACCGCCGAT AGCGCCCAAG CCAAGGCTAC AGGCTCAATC TGCGACGGCG TCGATATCAA TATTGAATCG ATTTACCGCT TCGCCCAAGA AGTGCCCTTC GAAGAAATCC AATTTATTCT TAAAGCCTCG GAATTAAACA GTAAATTATC CGATGAAGGC ATGTCCAAAC CCTATGGCTT GGAAGTCGGC CGCACCATGA AGAACGGCAT TGCTGCGGGG ATCATCGGTG AGGACTTACT CAACAAGATT GTGATGCTCA CCGCGGCGGC TTCGGATGCG CGTATGGGCG GTGCCAATCT GCCCGCCATG AGCAATTTAG GCAGTGGTAA CCAAGGAATT GCGGCGACGA TTCCAGTAGT CATCACCGCC CAGTGTTATA AAGTCAGCGA AGAGAAACTG GCTCGCGCGC TGATCATGAG CCACCTCGGG GCGATTTATA TCAAATCCCA CTATCCACCG TTATCGGCAT TCTGTGGCAA TACGGTCACT AGCGCTGCCG CCTCTATGGC CATGGTGTAT TTAGCGGGCG GCAGTTTCGA GCAATCCTGC TTTGCGATTC AAAACGTCAT CAGCGACAGC TCGGGCATGG TCTGTGATGG TGCCAAAGCC TCCTGCGCGA TGAAGGTCAG TACCTCATCG AGTGCGGCGG TGCGCTCCTT CTTAATGGCG CTCAACAGCC AAAACGTTTC AGGCCAAGGT ATCATCGCCA AAGATGTTGA GAAAACCATT AAGAACATAG GCAAGATGGT ACTCAATGGC ATGTCATCTA CGGATGTCAC TATCATTAAC ATCATGTCTG AATAA
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Protein sequence | MKPLWQQYIQ IINQVVKPAL GCTEPIAAAY AAAVARTLLP VAPESIAVQV SDNLYKNSMG VYVPGTGKIG LAIAAAAGAL AGNADAGLEV LANVTPEQVA QAQTLIDAGK VKVERTETDE FIYCCVSLTA GEQEAMVKIC GGHTLIAEKR LNGELVFTAD SAQAKATGSI CDGVDINIES IYRFAQEVPF EEIQFILKAS ELNSKLSDEG MSKPYGLEVG RTMKNGIAAG IIGEDLLNKI VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVITA QCYKVSEEKL ARALIMSHLG AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC FAIQNVISDS SGMVCDGAKA SCAMKVSTSS SAAVRSFLMA LNSQNVSGQG IIAKDVEKTI KNIGKMVLNG MSSTDVTIIN IMSE
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