Gene Shewana3_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2972 
Symbol 
ID4478180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3572642 
End bp3573916 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content51% 
IMG OID639727576 
Producthypothetical protein 
Protein accessionYP_870603 
Protein GI117921411 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTC TATGGCAGCA ATACATTCAG ATCATTAACC AAGTGGTTAA ACCCGCCTTA 
GGCTGTACCG AGCCGATCGC CGCGGCCTAT GCGGCAGCCG TAGCACGCAC CTTATTACCG
GTAGCACCCG AGTCAATTGC GGTGCAAGTT TCTGATAACT TGTATAAAAA CTCGATGGGT
GTTTATGTGC CCGGTACAGG TAAAATCGGT CTCGCTATCG CCGCAGCCGC AGGCGCGCTT
GCAGGTAATG CCGATGCGGG ATTAGAAGTC TTGGCCAACG TGACGCCTGA ACAAGTGGCA
CAGGCACAAA CCCTTATCGA TGCGGGTAAA GTGAAGGTTG AGCGTACCGA GACCGACGAA
TTTATCTATT GCTGCGTCAG CTTAACCGCT GGCGAGCAAG AGGCCATGGT GAAAATCTGT
GGCGGCCATA CCTTGATTGC CGAGAAGCGC TTAAATGGTG AGTTAGTATT TACCGCCGAT
AGCGCCCAAG CCAAGGCTAC AGGCTCAATC TGCGACGGCG TCGATATCAA TATTGAATCG
ATTTACCGCT TCGCCCAAGA AGTGCCCTTC GAAGAAATCC AATTTATTCT TAAAGCCTCG
GAATTAAACA GTAAATTATC CGATGAAGGC ATGTCCAAAC CCTATGGCTT GGAAGTCGGC
CGCACCATGA AGAACGGCAT TGCTGCGGGG ATCATCGGTG AGGACTTACT CAACAAGATT
GTGATGCTCA CCGCGGCGGC TTCGGATGCG CGTATGGGCG GTGCCAATCT GCCCGCCATG
AGCAATTTAG GCAGTGGTAA CCAAGGAATT GCGGCGACGA TTCCAGTAGT CATCACCGCC
CAGTGTTATA AAGTCAGCGA AGAGAAACTG GCTCGCGCGC TGATCATGAG CCACCTCGGG
GCGATTTATA TCAAATCCCA CTATCCACCG TTATCGGCAT TCTGTGGCAA TACGGTCACT
AGCGCTGCCG CCTCTATGGC CATGGTGTAT TTAGCGGGCG GCAGTTTCGA GCAATCCTGC
TTTGCGATTC AAAACGTCAT CAGCGACAGC TCGGGCATGG TCTGTGATGG TGCCAAAGCC
TCCTGCGCGA TGAAGGTCAG TACCTCATCG AGTGCGGCGG TGCGCTCCTT CTTAATGGCG
CTCAACAGCC AAAACGTTTC AGGCCAAGGT ATCATCGCCA AAGATGTTGA GAAAACCATT
AAGAACATAG GCAAGATGGT ACTCAATGGC ATGTCATCTA CGGATGTCAC TATCATTAAC
ATCATGTCTG AATAA
 
Protein sequence
MKPLWQQYIQ IINQVVKPAL GCTEPIAAAY AAAVARTLLP VAPESIAVQV SDNLYKNSMG 
VYVPGTGKIG LAIAAAAGAL AGNADAGLEV LANVTPEQVA QAQTLIDAGK VKVERTETDE
FIYCCVSLTA GEQEAMVKIC GGHTLIAEKR LNGELVFTAD SAQAKATGSI CDGVDINIES
IYRFAQEVPF EEIQFILKAS ELNSKLSDEG MSKPYGLEVG RTMKNGIAAG IIGEDLLNKI
VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVITA QCYKVSEEKL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC FAIQNVISDS SGMVCDGAKA
SCAMKVSTSS SAAVRSFLMA LNSQNVSGQG IIAKDVEKTI KNIGKMVLNG MSSTDVTIIN
IMSE