Gene Shewana3_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2959 
Symbol 
ID4478167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3552383 
End bp3553984 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content44% 
IMG OID639727564 
Producthypothetical protein 
Protein accessionYP_870591 
Protein GI117921399 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG ATAAATTACA CATTCGTTCT CGATTTAAAA ATTTGGAAAA CGTAAAGGTG 
GACTTTGATG AAGACCACCT GATGACTGTG GTGGTGGGGC GCAACGGTTC GGGTAAATCC
AACGTGCTGG AAGCGTTAGT AGCGATATTT AGGAACCTTG ATTTAGGCGA AGAACCACCG
TTTTCATATG AGTTGATTTA TCGACTTGGC GAGCCTCGCA AACCAAATCA GCCCAGCGAA
CGATGGCTGG AAATCACTAT TGATGCCGAT CCGACTCGTG GCACTACCGC TAAGCAATAT
CAAGTACAGG TGCGAGACTT GTTGGAAGAA GACGCATCTG AAGACATGTT TGGCAAGACT
GCATCAGGAA ATATCGTTCC GTTTTCAAAG GTGAAACGCG ATAAGGAAGG GAAAGCACCA
TATTTGCCAA ACTATGTATT TGCTTACTAT TCTGGCCCCA GTGATCGCTT AGAGAATCAC
TTTAAGAAAC ATCGCACCGA TTTTTACCGT CGTCTGCTTA AAGATGAGTT GGATTTAAAG
GGCGATATTC GCCCGCTGTT CTATGCTAAA CCCCACCATA GTCAATTTGT ACTATTGGCT
TTTTTCTTAT CAGAGCAAGA CAGCGCAGAA AAAGCGTTCT TGCGCGAGCA CTTAGGCATT
GAAGGTTTAG ACAGTATTCA CTTCGTGATG CGACAACCCG GTTGGGCAAA ACAAAAGGGT
GAATTGTTTT GGGGTGCGCG GGGCGTTGTT CGCCGCTTTT TGGACGAGCT AATTAAACAC
ACGTTGTCAC CGGTTAAGGT AACGCGCCAA GAAGATACCT CTTTGACTGG TAGTAATATT
CGTAATGAGT TCTTTCACCT ATTCTTGCCC GATGTAAACG CATTACGTGA GTTTGCCAAA
GATCTCAGCC CTGATGAGTT GTTTAAAATG CTCGAAAGTA CGCTGCTTTC AGAAATCATC
TCAGAAGTTA GTATTCGGGT GAATGTGACT AGCAGTAAAG ACCCTCTCAC CTTCCGAGAA
CTCAGTGAAG GTGAGCAACA GCTTCTCACC GTATTGGGTC TGCTCAAATT TACTGGTGGC
AAAGACTCCC TATTTTTACT TGATGAGCCT GACACGCATC TCAATCCCTC ATGGGCAGTG
AAGTATCTGA AGTTCCTCCG CGATTTCGTA CCAAACCATG AAACTAGCCA TTTGCTGATG
GTAACACATC ATCCACTTGC TATTGCTGAG CTGAAAAAAG AGCAAGTTCA AGTGATGAAA
CGAAACGGTG ATCAGCAAAT TGTCGCTAAG ATGCCTGCTG AAAACCCACG GGGTATGGGG
ATAAATTTGA TACTGCGCAG TGATATGTTT GGTCTTCAAA CCACGTTGGA TGATGATACT
AATCAGAAAC TCAGTAATAG AAATGCTCTC GCCGCCAAAG ATTCTTTATC TAAAGAAGAA
GTAGTGCGTG AAAATGGATT TCCTGCAGAG AATGAAGAGC AGTATCTAGC CAGACTTAAC
TCGGAGCTTG GGCAATTAGG CTTCAATTTG GCGACAGATG ATCCGGATTA TCTGGAGTTT
CTTCGCAACA AGTACCACGC CAATCAGGAG GCCGGTCATT AA
 
Protein sequence
MKVDKLHIRS RFKNLENVKV DFDEDHLMTV VVGRNGSGKS NVLEALVAIF RNLDLGEEPP 
FSYELIYRLG EPRKPNQPSE RWLEITIDAD PTRGTTAKQY QVQVRDLLEE DASEDMFGKT
ASGNIVPFSK VKRDKEGKAP YLPNYVFAYY SGPSDRLENH FKKHRTDFYR RLLKDELDLK
GDIRPLFYAK PHHSQFVLLA FFLSEQDSAE KAFLREHLGI EGLDSIHFVM RQPGWAKQKG
ELFWGARGVV RRFLDELIKH TLSPVKVTRQ EDTSLTGSNI RNEFFHLFLP DVNALREFAK
DLSPDELFKM LESTLLSEII SEVSIRVNVT SSKDPLTFRE LSEGEQQLLT VLGLLKFTGG
KDSLFLLDEP DTHLNPSWAV KYLKFLRDFV PNHETSHLLM VTHHPLAIAE LKKEQVQVMK
RNGDQQIVAK MPAENPRGMG INLILRSDMF GLQTTLDDDT NQKLSNRNAL AAKDSLSKEE
VVRENGFPAE NEEQYLARLN SELGQLGFNL ATDDPDYLEF LRNKYHANQE AGH