Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2957 |
Symbol | |
ID | 4478165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3550768 |
End bp | 3551529 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639727562 |
Product | HNH endonuclease |
Protein accession | YP_870589 |
Protein GI | 117921397 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAATA GTATAACTCC GCAACAATTC GAACCTGCAT TTGATATTGC TAAGGCTATG CGCGAAGGGC GTTTAGATAC ATCTCAAGCT CTTGAACGAA TGGTTGAAAA TGGCTTTAGT CATAGTTCTG CAACCATGTA CCTGAACGCA CTTATGGCGA TGCCAGTTGG AAAGGTATAT CAAAAAACCA TTAATAACCC AGCAGCTCGC TATTATCTGC AGAGATTTAT GAGCGAGATG ACTGCGACTG AATTTGCGAC TGTATTATTG TCAGTCACGA GGCATATACA TTACTACAAT GCACAAGGAG CGGGTAAACA TCGGCAATTG GCCACCATCC TAGCGGAGTT TCAATCTCTA GCTAAAGTAC ATTACGGTCA AAACTTTAAC CCTACACTAC TACCTTCTGA GATTAGTGAA GCCGAAACCG GATTTGTATT TCATGAAGGC GCGATGAAAA CCATTGAGCT TAGTGTGCAT GAGCGAGAAC CTGCTGCACG AAGAGCTTGT ATTGAGCATT ATGGTGTTTC TTGCCACGTG TGTGGATTCG ATTTTGAGCA TGCCTATGGT GATATAGGAA AAGGTTTCAT TCATGTTCAC CATAGAGTTG ATTTAGCTTT AGTTTCAAAT CGCAGAGAAG TTAACCCTAT TGAAGATCTG ATCCCCGTAT GCCCTAACTG CCATGCTATG CTGCATACTG AAACGCCCGC GATGGCGGTC GATAAACTCA AAGAATTGCT TAAACAGAAT CTTCAAGGAT GA
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Protein sequence | MVNSITPQQF EPAFDIAKAM REGRLDTSQA LERMVENGFS HSSATMYLNA LMAMPVGKVY QKTINNPAAR YYLQRFMSEM TATEFATVLL SVTRHIHYYN AQGAGKHRQL ATILAEFQSL AKVHYGQNFN PTLLPSEISE AETGFVFHEG AMKTIELSVH EREPAARRAC IEHYGVSCHV CGFDFEHAYG DIGKGFIHVH HRVDLALVSN RREVNPIEDL IPVCPNCHAM LHTETPAMAV DKLKELLKQN LQG
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