Gene Shewana3_2951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2951 
Symbol 
ID4478158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3544529 
End bp3544966 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID639727556 
Productcyclase/dehydrase 
Protein accessionYP_870583 
Protein GI117921391 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA TTTCTCGAAG TGTGTTAGTT CGTTTTAGTG CGATGCAAAT GTATGATTTA 
GTCAATGATG TTGAGTCGTA CAAAGAGTTT TTACCCGGTT GTGTTGGCGG TAAAGTGCTT
GAGTTTGATG GTAAAACCAT GGTGGCCTCG GTCGATGTGA GTAAGGCGGG GATCCGTAAG
ACCTTCACTA CGCGCAATCA GGTGGTGCCG GGAAAGAGTA TCGAGTTAAG ACTTGAAAAT
GGGCCTTTTA AACACTTATT CGGCCAGTGG CGTTTTACCG AGTTGACGGA AGATGCCTGT
AAGGTGGAGT TTGACTTAAA TTTCGAGTTT TCCAGCTCAT TGGTCGATAT GGCTTTTGGT
AAAGTGTTTA ATGATCTTAT GGTGTCAATG GTGACGGCAT TTACCAGCCG CGCTAAGGTA
ATTTACAGTG ACAAATGA
 
Protein sequence
MPQISRSVLV RFSAMQMYDL VNDVESYKEF LPGCVGGKVL EFDGKTMVAS VDVSKAGIRK 
TFTTRNQVVP GKSIELRLEN GPFKHLFGQW RFTELTEDAC KVEFDLNFEF SSSLVDMAFG
KVFNDLMVSM VTAFTSRAKV IYSDK