| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2946 |
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| Symbol | |
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| ID | 4478153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3540394 |
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| End bp | 3542121 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639727551 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870578 |
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| Protein GI | 117921386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACT CTCTCGATTT TGATCAGGCA CTCAATGAGC TTGATGTATT ACTGCAATCT
GATCTTAGCG CCGCGCAGAA AAAACTGGCC GAATATGAGA AAGAATTCAG CAAATTAACT
TCAGTGCAAC AAGGCCGACT GAGGATAGAT AGAGCGATAG GTTATTTTTT CACAGGTGAA
TATGCCAAAG CGTTAGACGA TCTGCATCAG GCCGAAACCT TAATCACAAG TTCTGAATTA
TTAGCATCGG TTTATAGCTA TCAAGCCACT GTCTATATAG GGATGCGCGA CTATGACAAA
GCCTTATCGG CTGTCGCCAA AGCATTAGCC CTAGTTGTGA ATATCGATGA TATTACGATT
AAACGTCACT CTTATCTAAG AATTGCCAAT ATTTATTCTG AAATGGACGC TTATAGCGAT
ATGGGCCTCT ATGCCAATAA GGTGTTACAA CTCGCTCAGG AAACCGATGT CCGCGATATT
TGCCATGCCA AATTGCTGCG GGCGATTTAC TTGCTCGGTG TGAAAAGTCC CGACACCTTC
GATGCCTTCG AAGATAGCCG TCAATATTGT GATGCGAAGC AATTTCCCCT TTTGGCGACT
ATGTCGATGA AAGGCAAAGG GATGGTTTTG CAGGAGCGGG GTGACTATTT AGGCGCGAGA
GCGATTTTGC TATTAGCGTT AAAAGGGTAT GAAGCTTTTC AATTTCAATT AGAAATCAGC
CATGTGCATG CACTACTTGC CGAGAATTAC TTTGCAACGG GTGAGCTGGT TCAAGCAAAA
AGTCACGCTG TTAAGGTGCT CACATTTCCC GATGATAATA GTTATATCGA ACATAAGCAT
ATTGCCTACA AAGTGTTTGC CGAGTTGATG GCGGCGGACA AACAATTTGA GCAAGCCTAT
GAATACTCCA GAAAAGAGCA ACATTATAAT CAACTGATTT TTGACCAATC TAAGATGAAA
ACCCTTGCTT ATCAGGCGGC TAAGTTTAAT GCCGATGAGC AGGCGCGTGA AATCAACTTG
CTGAATAAAG AGCGCGAACT TTACATCGCT CAGCAAACGG TAAAAGAGCG CGAGTACACT
AATATGCTGA TGTTTATCAC CATATTAGTT GGCGGGCTGT TTTTCCTCGC GATTTTGTTA
GTGGTGGGTA ATTTGCAAAA ACGGCGTTTT ATGCGCATGG CCAGAATGGA TGCTTTGACG
GGCGTGCTTA ACCGTGGAGC AGGGCAAGAT CTGGGGGAAA ATCTGTTTGT GCAAGCCGCT
GCCCGAGGGG GCGATTATTG CGTGATTTTA TTCGACTTGG ACCATTTTAA ACGGATTAAT
GATTCCTACG GCCATGGTAC GGGTGACTGG GCGCTTAAAA AAGTCGTAGA AGTATTAAAA
CCCCATGTTC GCAATGGTGA TGTGTTTGCC CGGATTGGCG GTGAGGAATT TGCACTATTC
TTGCCTTACG CCAATGAATC TAAGGGGATG GAAGTTGCCG AACAATGCCG TCGACGACTC
GAAGCCATTG ATACTCATCT GTCGGGGCAT AAATTTACTA TCACCGCGAG CTTTGGGGTT
AGCGGTATGA CAAAAGAAGA CTTAAGCCTA GACCCTCTGC TGCACCGTGC CGATATGGCG
CTGTATGCTG CAAAATCCAA TGGTCGTAAC AGTGTATTCT GTTATGAGGA CGCTTTAGCC
TCAGATAAAC GCGCCACCAA TATTACCAGT CAGTTTGCAA GGCAGTAG
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| Protein sequence | MANSLDFDQA LNELDVLLQS DLSAAQKKLA EYEKEFSKLT SVQQGRLRID RAIGYFFTGE
YAKALDDLHQ AETLITSSEL LASVYSYQAT VYIGMRDYDK ALSAVAKALA LVVNIDDITI
KRHSYLRIAN IYSEMDAYSD MGLYANKVLQ LAQETDVRDI CHAKLLRAIY LLGVKSPDTF
DAFEDSRQYC DAKQFPLLAT MSMKGKGMVL QERGDYLGAR AILLLALKGY EAFQFQLEIS
HVHALLAENY FATGELVQAK SHAVKVLTFP DDNSYIEHKH IAYKVFAELM AADKQFEQAY
EYSRKEQHYN QLIFDQSKMK TLAYQAAKFN ADEQAREINL LNKERELYIA QQTVKEREYT
NMLMFITILV GGLFFLAILL VVGNLQKRRF MRMARMDALT GVLNRGAGQD LGENLFVQAA
ARGGDYCVIL FDLDHFKRIN DSYGHGTGDW ALKKVVEVLK PHVRNGDVFA RIGGEEFALF
LPYANESKGM EVAEQCRRRL EAIDTHLSGH KFTITASFGV SGMTKEDLSL DPLLHRADMA
LYAAKSNGRN SVFCYEDALA SDKRATNITS QFARQ
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