| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2944 |
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| Symbol | |
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| ID | 4478151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3535861 |
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| End bp | 3538332 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727549 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_870576 |
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| Protein GI | 117921384 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000178601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.742035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTAT TACAGCCTGT ATTTCGCTTA TCACTTATTG CACTCGCCTG CCTCAGTGCT
TTACCACACA CAGCCTACGC CGATGACACA CCTTCCGCTC GCGATGAAAA CGTCGAACGC
ATAACGGTAT ACGGCAGACA AAACTCTGTG GTGAAAAACT CAGGGCTGGC GACTAAGTCA
GATATGTCCT TAATGGAAAC CCCTGCGGCG GTTGTTATCG TTGACCAGGA GCTGATTAAC
AGCCAAGGAG TCGATAATCT GCAGGACTTG ATTCGCAATA TCAGCGGGGT GACTCAAGCA
GGCAATAACT ACGGCATTGG GGATAACTTG GTTATTCGCG GTCTTGGCGC AAACTATACC
TATGACGGCA TGTATGGCGG TGCCGGCCTT GGCAACACCT TTAACCCCAC TCGCTCCCTA
ACTAATGTGG AATCCGTTGA AGTTTTAAAA GGGCCAGCGA CTGGGCTCTA CGGCATGGGC
AGCGCGGGCG GCGTGATCAA CCTGATTGAA AAGAAACCGC AATTTGAATC CAAACACAAA
ATCACCACTG AAGTTGGCCA GTGGGATACC TACTCGCTCG CCATCGATAG CACGGGGGGG
ATCACAGATG ATCTTGCTTA TCGTTTAGTC GCCAAAACCG CCCGCAGTGA AGGCTACCGT
GATTTAGGCG CCGACCGTGA TGAAGTGTTC GGCTCACTCA AGTGGGTATT AAGTGATAGC
CAAGATCTGA TGCTATCAGG CGCGTATATC AAAGACGCCA TTGCCGTTGA CTCCATCGGC
CATCCAATCC GTATCTACAA TGCCGATTCT GTCGGAGGTA AAACCGCTGG TGAAGTCACT
TGGCAAGATT TGATAAACGA TCCTAATGGT CAAGGCATAC AGCTAACCGA CGAGCAGCGT
CAGCAATTGG CGGCATCACT CGCCAGTGGT GATGGCTTAA CTCCTTATTC CTTCGGTGAC
GCGGGATTAA TTTCTCCCAT GGCAAAGGAT AATGAAGGTG AAGAATTAAG ATTCAAGCTG
ACCCACAATA TCTACTTTAC CGATAATCTG TTCCTCAACC AGCAGTTGCA ATATCGCGAC
TACACCACAG GTTTTGCCCG CCAAACAGGG GCTTACAACT ATGTGTATTG GAAGCGTAAA
ATCAAGATTG GTGGCGTACC GACTGATGTG ATTAACGAAG ATCCCCGCGC GCCACTGGTT
GAAAATGGTG TGCTCTATCC CTTTGCCGCC AGACGTCAGG AATACCGCCA GCTCGATGCC
GAAGAAACCT CGTGGCAGTA TTTTGCCGAT CTACGTTACG ACTTCCAAAT CGGCAATATC
GACAACGAAT TGCTGGTGAA TGCTAACTAC GAAGACCGCG ATATTCGCCT CGAGCAATTC
TCGATTTACG ATGCAGACCA AGTCATTAAA AACAAACAAG GCGAAGTGAT TTACCGTGGG
TCGCTGCCAT ACATTTACGA TATCCGCAAT CCAAACTGGG GAACGGGTAA ATTTGCCGAC
TACGATCCGC TCAAAACCGC CAACTACAAT AAAAAAGTCA GCGCTTGGGG CTTAGGCGTG
CAACATGTGG GTTATTTAGG TTATGGCTTT ACCACCCGTG TGGGCGTGGC CTTTAACGAA
ATCAAACAGA GCTATGAGCA CTTAGGTGTG GATGAGCGCT ACAGCGCGAG TCAAGCCAGC
CCCACTCCTG AGGAAGATAG CAAAGATAAC GGTGTGACCT ACAACTTGGG CTTAACCTAT
ATGCCCATTG ACGATTTATC GTTTTTCGTC AATCACTCAA AGGGCCGCAC CGCCTATAGC
ATCTTAGGCT CAATCACAGG GGAAAATACC GACCGCGAAG ACTCAGAATC CGTCAGTAAC
GATCTCGGTA TGCGCTTTAA AGCCTTTGAT GATCAAATGT TGGCCTCACT GGTGTTCTTT
AAAAGCTCAC GCACAAATGT GCCTTACACC AACCCAGACT ATAACGCTGG TGTGTCAGGT
GCCGAGGTGC CGGTGTACTT TTACGATGGC AGCGAAGATA CCCAAGGGGT CGAGTTGGAT
CTCAATGCCC ATCTAAACGA TAACTGGCGC ATCAATCTTA ACGGCATGTA TCAGGATGCG
AGGGATAAAC AAAACCCGAA TGACAAAGCC AACTACGACA GCCGTCAAAA AGGTGTGCCC
TATGTGACAG CCAGTGCTTG GGTAACCTAT GGTGCAGACT GGTTTGCCTT ATCAAGCCCT
ATTGAGCTGA GTTTAGGTGC CAAGTATGTG GATGATAGAA GCACACACTC AAGCTCATTT
GGTATCCCTG ATGGTTATGT GCCGAGCTAC ACCTTAGTGG ATTCTGCCAT CAGCTATGCC
ACCGACTCCT GGAAGTTACA ATTGAATATC AACAACCTAT TCAATAAAGA CTATTACAGT
AAGGCCATGT TCCTCGGTGG TATGCCGGGC GAAGAGCGTA ATGTGAAGCT GCAATATAGC
TACAGTTTCT AA
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| Protein sequence | MPVLQPVFRL SLIALACLSA LPHTAYADDT PSARDENVER ITVYGRQNSV VKNSGLATKS
DMSLMETPAA VVIVDQELIN SQGVDNLQDL IRNISGVTQA GNNYGIGDNL VIRGLGANYT
YDGMYGGAGL GNTFNPTRSL TNVESVEVLK GPATGLYGMG SAGGVINLIE KKPQFESKHK
ITTEVGQWDT YSLAIDSTGG ITDDLAYRLV AKTARSEGYR DLGADRDEVF GSLKWVLSDS
QDLMLSGAYI KDAIAVDSIG HPIRIYNADS VGGKTAGEVT WQDLINDPNG QGIQLTDEQR
QQLAASLASG DGLTPYSFGD AGLISPMAKD NEGEELRFKL THNIYFTDNL FLNQQLQYRD
YTTGFARQTG AYNYVYWKRK IKIGGVPTDV INEDPRAPLV ENGVLYPFAA RRQEYRQLDA
EETSWQYFAD LRYDFQIGNI DNELLVNANY EDRDIRLEQF SIYDADQVIK NKQGEVIYRG
SLPYIYDIRN PNWGTGKFAD YDPLKTANYN KKVSAWGLGV QHVGYLGYGF TTRVGVAFNE
IKQSYEHLGV DERYSASQAS PTPEEDSKDN GVTYNLGLTY MPIDDLSFFV NHSKGRTAYS
ILGSITGENT DREDSESVSN DLGMRFKAFD DQMLASLVFF KSSRTNVPYT NPDYNAGVSG
AEVPVYFYDG SEDTQGVELD LNAHLNDNWR INLNGMYQDA RDKQNPNDKA NYDSRQKGVP
YVTASAWVTY GADWFALSSP IELSLGAKYV DDRSTHSSSF GIPDGYVPSY TLVDSAISYA
TDSWKLQLNI NNLFNKDYYS KAMFLGGMPG EERNVKLQYS YSF
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