Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2936 |
Symbol | |
ID | 4478940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3526850 |
End bp | 3527485 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727541 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_870568 |
Protein GI | 117921376 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TCACGGGACT TTTACTCGCC AGCAGTTTGA GCTTAGCCCT TGGCGCCTGC GGCGGCAGTG GCGACGATGA ATTAACACCA ACGATCCCGA CTCCCGATCC GACCCCACCG AGCTTAAGCG CCGATGTCTG TTATTTAATG AGCACCACAA AGGGAGATTT GACCTTAGCC ATCGACCTCA CCCATATGCC GATCACGGGT AAGAACTTTA AACAATATGT CGATAAGTCA TTCTATAACG GTACTTTATT CCACAGAACC ATCAACAACT TTGTGATCCA AGGCGGTGGT TTCACCACGG GATTACAAAG CAAGCCGACC AGCGCGCCGA TTAAAAACGA GGCCGCCGTC GGCATCAGCA ACAAACGCGG CACTATCGCA ATGGCGCGAA CCACAGTGCC AGACTCAGCG ACATCACAGT TCTTTATCAA TGTGTTAGAT AATCCTCAGC TCGATGCTTC GGCGAGCAGC TATGGTTATG CCGTGTTTGG TAAAGTTGTC GAAGGAATGG ATGTGGTCGA TCAGATAAGC ATTGTGCCAA CCAAAACCAG CAATGGTTTT AGCGACACAC CTGTGAATGA AATTTTGATC AATAGCGTGA TGGAAACGAC CTGTCCCGCC GCCTAG
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Protein sequence | MKRITGLLLA SSLSLALGAC GGSGDDELTP TIPTPDPTPP SLSADVCYLM STTKGDLTLA IDLTHMPITG KNFKQYVDKS FYNGTLFHRT INNFVIQGGG FTTGLQSKPT SAPIKNEAAV GISNKRGTIA MARTTVPDSA TSQFFINVLD NPQLDASASS YGYAVFGKVV EGMDVVDQIS IVPTKTSNGF SDTPVNEILI NSVMETTCPA A
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