| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2933 |
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| Symbol | |
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| ID | 4478937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3519425 |
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| End bp | 3521683 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727538 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_870565 |
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| Protein GI | 117921373 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC CTGTGCCTGT AAATGCTGAT GGCTCAACCG CGTATAACCT AAGTGCGGGG
CAGCCCTTTC CCTTGGGGGC GACGGTCGAT GATGGCGGGG TGAATTTCGC CCTGTTTTCG
GCCCATGCCA CTGGGGTGGA GTTATGTCTG TTTAATGCCC GAGGCGAGGT GGAAATTCAG
CGCATCGCCT TGACGGAGCA GACCCAGCAG ATCTGGCATT TGTATGTGCA TGGACTGAGT
GCCGGCCAGC TTTATGGCTA CCGTGTTTAT GGTCCCTACG AGCCGCAATT AGGCCACAGA
TTTAATCCGC ATAAGTTGCT ATTAGACCCT TACGCTCGCC AGCTCGTGGG ACGCTATCAC
CACCATATCG CCAACTTTGG TTATGAGATT GATAACCCCA ACGAGGACTT ATCTTTCAGT
ACCTTAGATA ACGCGGACTT TGTCCCAAAA TGCAAAGTGG TCGATACTCG ACCCCTTTTG
GATGCCGCTA AGGCCCATAC TATTCGGCCG CTTGCAAGCA AGCGTGAGCC ATTGCCACTT
GAGCAGTGCA TTATCTATGA GATGCACTTA AAGGGATTTA CCGCGCTGCA CCCTGAGATA
GATGCGCCGC TGCGTGGTAC CTTTGCTGGG CTGGCATCGA ATGCCGCGAT AGATTACTTA
GTCAATCTCG GCGTGAATTG CGTCGAGTTA CTGCCGGTTC AGGCATTTTT CTCCGAGCCC
TTTCTGCTTG AAAAACAGCT ATCTAACTAT TGGGGCTATA ACAGCATTGG CTTTTTTGCG
CCTGAGCCGA GTTATCTCTC GGGTGAGGAT ATCGGCGAGT TTCGCAACAT GGTGGATGCG
CTGCACGGTG CGGGCATCGA AGTCATTCTC GATGTGGTCT ATAACCACAG CGCCGAGGGC
AGTCGTCTCG GACCGACTTT TAGCTTTCGC GGCATCGACA ATCTGAGTTA TTACCGACTG
CATCCAAACG ATAAACGCTT TTATATCAAC GATACCGGCT GCGGCAATAC CTTAAACCTC
AATCACCCAC GCATGTTGCA GTTGGTGTTA GATTCGCTGC GTTACTGGGT CGAAGTGATG
GGGGTCGATG GCTTTCGTTT CGATTTAGCC GCCTGCCTTG GCCGTGAAGC CTATGGATTC
GACCCAGGTA GTGGTTTTTT CGATGCGTTG CTGCAAGACC CAGTACTTTG CCGGGTGAAG
CTGATTGCCG AGCCTTGGGA TATTGGTCCG GGTGGGTATC AGCTGGGTAA TTTCCCGGTG
GCCTTTAGCG AGTGGAATGA CAGATACCGC GACACTATGC GGCGTTTTTG GCGGGGCGAT
CACGCCATGT TGCCCGAGTT TGCGAGGCGA TTTCATGGCT CGGGGGATTT CTTTGAGCAT
AGCGGTCGTC CTCCTGCCGC CAGTATCAAC TTTTTAACCA GTCACGATGG TTTTACCCTT
AAAGATTTAG TGAGTTATTG CGAGCGGCAC AATTGGGCCA ACGGTGAAGA AAACCGCGAC
GGCCACCATG AGAACTTCAG CCATCACTAC GGAGTAGAGG GCGACACCGA CGACGCCACC
ATTCTTGCGC TGCGCGCTCG CCAGCAACGC AATCTATTGA CCACATTATT CCTTTCCCAA
GGGGTGCCCA TGTTACTCAG CGGCGATGAG ACGGGCCGCA CCCAAGGCGG GAATAATAAC
GCCTATTGCC AAGATAACCC ATTGAATTGG TTCGATTGGT CATCGGATGG CATGGATAGC
TCATTGCTGA GTTTCACCTC ACAGTTGATT GCCTTGCGTA AACGCTTTCC GCTCTTGTGT
GCCAAACGTT TTATCCATGA GCAGCTAGTG GCCAATGCTT TCGATTGGTC GTCTGAGTCA
TCTTCAACTC AAGCAGCAAG CCCTGTATCA ACCCCATCGG GGGCGAGGCT GGATTGGTTT
AGTCGCCAAG GTGAACCTAT GAGCAAAAGC CTGTGGAGTG AGTCCATGGG CCGCAGCCTC
TGCGTGGTGC TATCGGGCAA TTTAACCGCC ACTCAACCAC AGACTCAGGG TGACAGCCTT
CAAGCACTGT TGTTAATGGT CAATGCCGAT GAGCATCCCT TGGCCTTTAC TCTGCCGATT
TTTGACGGTT TAGGGCCGTG GCAATGTCTG CTGCATACCC AAACCGACCC ACAATTTTTA
ACTCCCACTG AGCCGCTGGA TGCTCAGTCC TCACCGACGC GGTACTTGCT ACAGGATCGC
AGTCTTATGC TGTTTCATGC TGATTTTATA AGGAATTAA
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| Protein sequence | MTNPVPVNAD GSTAYNLSAG QPFPLGATVD DGGVNFALFS AHATGVELCL FNARGEVEIQ
RIALTEQTQQ IWHLYVHGLS AGQLYGYRVY GPYEPQLGHR FNPHKLLLDP YARQLVGRYH
HHIANFGYEI DNPNEDLSFS TLDNADFVPK CKVVDTRPLL DAAKAHTIRP LASKREPLPL
EQCIIYEMHL KGFTALHPEI DAPLRGTFAG LASNAAIDYL VNLGVNCVEL LPVQAFFSEP
FLLEKQLSNY WGYNSIGFFA PEPSYLSGED IGEFRNMVDA LHGAGIEVIL DVVYNHSAEG
SRLGPTFSFR GIDNLSYYRL HPNDKRFYIN DTGCGNTLNL NHPRMLQLVL DSLRYWVEVM
GVDGFRFDLA ACLGREAYGF DPGSGFFDAL LQDPVLCRVK LIAEPWDIGP GGYQLGNFPV
AFSEWNDRYR DTMRRFWRGD HAMLPEFARR FHGSGDFFEH SGRPPAASIN FLTSHDGFTL
KDLVSYCERH NWANGEENRD GHHENFSHHY GVEGDTDDAT ILALRARQQR NLLTTLFLSQ
GVPMLLSGDE TGRTQGGNNN AYCQDNPLNW FDWSSDGMDS SLLSFTSQLI ALRKRFPLLC
AKRFIHEQLV ANAFDWSSES SSTQAASPVS TPSGARLDWF SRQGEPMSKS LWSESMGRSL
CVVLSGNLTA TQPQTQGDSL QALLLMVNAD EHPLAFTLPI FDGLGPWQCL LHTQTDPQFL
TPTEPLDAQS SPTRYLLQDR SLMLFHADFI RN
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