| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2924 |
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| Symbol | |
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| ID | 4478928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3504516 |
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| End bp | 3506060 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727529 |
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| Product | major facilitator transporter |
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| Protein accession | YP_870556 |
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| Protein GI | 117921364 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.771721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACA ATAGTCCAAA TGCAGAGAAT GATCTGCGCG AAGTCAAGCA GTTAGGCATG
TGGGCCTCGA TCACTAGCCT AAGTTATATT TTTTGGTTAG TGGGCGGCAT GGAGCTGGTC
GAGCGTATCG CCTATTACGG TGTCAAAGCC AGTGCGGGTT TATATGCCAA AGCCCCCGAG
TCGGCGGGCG GTCTGGGGAT CAGCCTCAGC GACTATGGCA TCATTATCTC GCTCTGGGCC
ATTATGCAGA CCTTTGTGCC CGTGTTTACT GGCGGGATTT CCGATAGGGT CGGCTACAAG
GAAACCATTT TTGCCTCAAC CGTGATTAAA ATCATGGGCT ACCTGACCAT GGCGTTTTTC
CCCACCTTTT GGGGTTTCTT ATCGGGGGCA TTATTACTCG CCATCGGCAC AGGGATATTT
AAACCCGGCA TTCAAGGCAC CTTAGTGCTC TCCACCAATC GCAATAACAC CTCCATGGCC
TGGGGAATAT TTTACCAAGT GGTGAATATC GGTGGCTTCT TGGGCCCATT GGTTGCCGTG
CATATGCGCC AGCTTTCTTG GGATAATGTG TTTTACGCCT GCGCCGCGAT TATCTCATTA
AACTTCTTGT TCTTATTAAC CTATACCGAG CCGGGTAAGG CCGAGCGCAT CGCCCGTAAT
CAGCAAATAA AATCCGGCGA AATTAAGCAA GAAGCGCTCT GGCGCGATGC TTGGCATGAG
CTGAAAAAGC CTATCGTGAT TTATTACATG CTAGTGTTTT CAGGCTTTTG GTTCCTCTTT
AACGCCCTGT TCGACGTACT GCCGATCCAC ATCTCCGAGT GGGTCGATAC CAGCGTGATT
GTAACTAGTC TGTTTGGCAG TGAAGGCACT AGCAACGGCA TTTTACAGTT CTGGCTCGGG
TTAAATAACG AAGGCACCAA GGTGATGCCA GAAGGCATGC TGAACCTCAA CGCCGGCCTG
ATTATGACCA GCTGCTTTTT AATTGCCGCC CTTACCGCCA AGTACCGCAT CACCACGGCG
ATGCTGATTG GCTGTTTACT GAGTATCTTA GCCTTTGTGT TTATCGGCGC CTTCCATGCC
GCTTGGTTTA TTGTGCTTGC CATTGCCATG TTCTCCATCG GCGAGATGAT GATAAGCCCG
AAGAAAAACG AGTTTATGGG TAACATTGCC CCCGAAGGTA AAAAAGCCAT GTACCTTGGT
TTTGTGATGC TACCTCAAGG GATTGGTTGG GGCTTAGAAG GCTATTTCGG CCCTAAACTC
TATGAGATTT TTGCCTCGAA AGAATTGTTC TCACGCGAGT TATTACTCGA GCGCGGCATG
AGCTCAACGG ATGTGAATGC TATCCCGCAA GGGGAAGCCT TTACCACCTT AGTGAGCTTT
ACTGGCGAAA ACGCCCATGA CCTGACTCAG CTGCTCTACC ATAGCCACAA TATCGGTATG
GCTTGGTATA TTATCGCCGC GATCGGCACC ATTTCGGCTG TGGGGATTTA TATCTATGGT
AAGTGGTTAC TGTCGCTGCA ACGGGCGCAG CAAGCCGCGC ACTAA
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| Protein sequence | MSHNSPNAEN DLREVKQLGM WASITSLSYI FWLVGGMELV ERIAYYGVKA SAGLYAKAPE
SAGGLGISLS DYGIIISLWA IMQTFVPVFT GGISDRVGYK ETIFASTVIK IMGYLTMAFF
PTFWGFLSGA LLLAIGTGIF KPGIQGTLVL STNRNNTSMA WGIFYQVVNI GGFLGPLVAV
HMRQLSWDNV FYACAAIISL NFLFLLTYTE PGKAERIARN QQIKSGEIKQ EALWRDAWHE
LKKPIVIYYM LVFSGFWFLF NALFDVLPIH ISEWVDTSVI VTSLFGSEGT SNGILQFWLG
LNNEGTKVMP EGMLNLNAGL IMTSCFLIAA LTAKYRITTA MLIGCLLSIL AFVFIGAFHA
AWFIVLAIAM FSIGEMMISP KKNEFMGNIA PEGKKAMYLG FVMLPQGIGW GLEGYFGPKL
YEIFASKELF SRELLLERGM SSTDVNAIPQ GEAFTTLVSF TGENAHDLTQ LLYHSHNIGM
AWYIIAAIGT ISAVGIYIYG KWLLSLQRAQ QAAH
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