| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2912 |
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| Symbol | |
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| ID | 4479039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3487437 |
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| End bp | 3488531 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727517 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_870544 |
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| Protein GI | 117921352 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA GTACCGCGAC TCCGGGAAAG GCGAGTAAAT ATGCCACCCT TGGCCTTCTG
GCACTCATAG TAATATTACT GCTTTGGTAC CTTGTGGCCG ACAGAATGAC CCCCTATAGC
TCACAGGCAA GGGTCCAAGC CTTTGTGGTG CCGATTGCTA CCGAAGTCAC GGGGCAGATT
TTGAAAGTCT ATGTGCAGGA TAACCAAGAT GTCGCCGAGG GCGCTCCCTT ATTCGATATC
GATCCTGAGC CCTATGATAT TGCCCTTGCC AAAGCCAAGT CTGACTATGA AACAGTGCTA
AATAGCGTTA AAGCCAATAA TGAAGGCGTT AAGGCGGCGG AAGCGAAATT ACAAGCCATG
CGTGCGTCTT ACAATAATTC AGTGAAAGAT GCCGAGCGGC AAGAACGTCT CTATCGCCAA
GACCCGGGGG CTATTTCAGT ACGCCGACTC GAAATCGCAC AAGCATCGCG AGAAACTGCC
AGCAGCCAAG TCACAGCCGC CGAAGCCGAT GTTAGGCGCG CCATTGAGGC CGCAGGGGTG
AATGGTGAAA ACAACTCACA ACTATTAAGT GCTCGTTCGG CGGTGAATAA AGCCGAGCGC
GATAGACAAA ATACCCATGT CGTCGCTCCA AGCCGTGGAG TGATCACCGA CTTAAATACC
GATGTGGGGC AGTTTATTAA CGCGGGCGCC CCCGCAATGA CTCTGATTGC TATCCACGAT
GTGTGGATTT CGGCGGATCT GACCGAAAAC AATCTCGGCA ATATTAAAGT GGGAAACAGA
GTCTCTATCC TGCTCGACAG CATGCCTGGA CAGTTATTTA GCGGCCAAAT ACGCAGTATT
GGCTATGGTG TGGATGATGG TAAAAAACAG GCCGTTGGTT CACTGCCGAC TGTCAGTAAT
AGCCGCGATT GGCTGCGCCA AGCACAACGC TTCCCCGTTA AAGTGTCGTT CTCAGCGGAC
GATATGCCCC CTGCAGCTAA CTTGCGTGTG GGAGGCCAAG CCGACATCTT GGTTTATACC
GAAGAACATG GCCTGATGAA CCCGCTCGGT GCACTGTATA TTCGGGTAAT GAGCCTCTTC
TCCTATCTGT ATTGA
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| Protein sequence | MTDSTATPGK ASKYATLGLL ALIVILLLWY LVADRMTPYS SQARVQAFVV PIATEVTGQI
LKVYVQDNQD VAEGAPLFDI DPEPYDIALA KAKSDYETVL NSVKANNEGV KAAEAKLQAM
RASYNNSVKD AERQERLYRQ DPGAISVRRL EIAQASRETA SSQVTAAEAD VRRAIEAAGV
NGENNSQLLS ARSAVNKAER DRQNTHVVAP SRGVITDLNT DVGQFINAGA PAMTLIAIHD
VWISADLTEN NLGNIKVGNR VSILLDSMPG QLFSGQIRSI GYGVDDGKKQ AVGSLPTVSN
SRDWLRQAQR FPVKVSFSAD DMPPAANLRV GGQADILVYT EEHGLMNPLG ALYIRVMSLF
SYLY
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