Gene Shewana3_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2910 
Symbol 
ID4479037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3484779 
End bp3485888 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content48% 
IMG OID639727516 
Producthypothetical protein 
Protein accessionYP_870543 
Protein GI117921351 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA ACGAACTAAT CGCGGTTGAA AATCGAATCG TCACTAAATT TATGGACATG 
TTTATCAAGT TTGGCATGCT CCTCGCGCTA GCGTCCTTCT GCTACACCAT CTTCTCCCCG
TTTTTAAATA TCATGCTCTG GGCAGTGATT TTAGCCGTGG TCATTTATCC CTTTCACCAG
CGTATCGCTA AACGGCTGAG TGATAAGCAA GGTCGAGCCG CTACTTTGTT GATTGTAATA
GGGTTAATGA TATTAGTTTT ACCTACCATT ATGATGGTTA GCTCCATGAC CGATAATATG
GGTAGCTTGG TTGAGCGCGT GAATCAGAAT ACCCTTGAGG TCCCAACCCC AAAGGAAAGC
ATTGCCAATA TTCCCTTTGT TGGCGCTAAA ATTTATGACT TTTGGCTGAA AGCATCGACC
GATTTACCCT CGTTAGTCAA AAGCTTACAA CCGCACTTGG GGGATGCTGC CAAGCAAGTC
ATTCATGCGT TAGCCAGCAT CAGTGCCAGT CTGTTGATGA GTATGTTTTC CTTCATTATC
GCAGGCATCA TGATGGCCTA TGGCCACGCC GGTGCACAAA GTTCGGCTCG TATTGCCACT
CGGATTGCTG GTCCTGAGCG CGGCGCAAAA CTGGTCAATA TCTGCTCTTC AACCATTCGT
GCTGTCGCCT TAGGCGTTAT TGGTGTGGCC TTCATTCAAG CCTTATTAAT CGGCATTGTG
ATGACCTTCG CGGGTATCCC CTTGGTGGGT ATCTTCTTTA TCTTGGTCTT GATATTAGGG
ATTGCCCAAA TCCCCGCGCT ATTAGTGACG CTTCCAGCGA TTGCTTATAT CTGGATGGCG
GGCGATAACG GCACAGTCGG CAGTATCATC TATACCGTGT TGCTGATCCT TGCGGGTGCG
GTGGACAACG TACTCAAGCC TATTTTCCTC GGCCGTGGAG TCGATGCTCC CATGCCAGTG
GTTCTCATCG GCGCCTTAGG CGGCATGGCC ACCAGCGGTA TTTTAGGGAT GTTTATTGGC
GCCACGCTAC TGTCTATCGG CTACCGCATC TTTATGATGT GGGTGGATGA AGGTCTCGAA
GAGGGATTGA GAGAGCAAGA TGACAATTGA
 
Protein sequence
MENNELIAVE NRIVTKFMDM FIKFGMLLAL ASFCYTIFSP FLNIMLWAVI LAVVIYPFHQ 
RIAKRLSDKQ GRAATLLIVI GLMILVLPTI MMVSSMTDNM GSLVERVNQN TLEVPTPKES
IANIPFVGAK IYDFWLKAST DLPSLVKSLQ PHLGDAAKQV IHALASISAS LLMSMFSFII
AGIMMAYGHA GAQSSARIAT RIAGPERGAK LVNICSSTIR AVALGVIGVA FIQALLIGIV
MTFAGIPLVG IFFILVLILG IAQIPALLVT LPAIAYIWMA GDNGTVGSII YTVLLILAGA
VDNVLKPIFL GRGVDAPMPV VLIGALGGMA TSGILGMFIG ATLLSIGYRI FMMWVDEGLE
EGLREQDDN