Gene Shewana3_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2908 
Symbol 
ID4479035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3481299 
End bp3481868 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content50% 
IMG OID639727514 
Producthypothetical protein 
Protein accessionYP_870541 
Protein GI117921349 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.590499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGTA AGCACGAAAT TCTCAATGCG CTCAAACTGT CGGCTTTAAC AAACCATCCT 
ATGCCAAGCA TCGATGTCGC CCCGCGGGTA GAAGATCTGG TTGGCCAGTT TGAAACCAAT
CTTAAAACCG TGGCGGGCAC ACTGCACCGC GAAGGCGGTC TTGTGGCACT ACAAGCCAAA
GTGGATGAGC TTGTCGCCCA AGGCTTACAG GTTATCTCCC TCGTAGAGGG CGTCACGGCA
AACCGTGAAG TACCGCCAAC GGCACATGAA CTTAGGGATA TCGATTATGC GGTCATTCCT
GGGGATGTTG GCGTTGCCGA AAATGGTGCC ATTTGGGTGA ATAATAAGAA TTTAGGCCAC
AGAGTCACGC CTTTTATCTG TGAAAACCTG ATCTTAGCGT TACCTAGCAC TAAAATTGTG
CCCAACATGC ATCAAGCCGC CAAGGACATT ACCTTAGATG CGGGTGAGTT TGGTGTGTTT
ATCGCAGGTC CCTCAAAAAC CGCCGATATC GAACAAGCCT TAGTCGTCGG CGCCCACGGT
GCCTGCAGCT TAAATGTGTA TCTGGTTTAA
 
Protein sequence
MSSKHEILNA LKLSALTNHP MPSIDVAPRV EDLVGQFETN LKTVAGTLHR EGGLVALQAK 
VDELVAQGLQ VISLVEGVTA NREVPPTAHE LRDIDYAVIP GDVGVAENGA IWVNNKNLGH
RVTPFICENL ILALPSTKIV PNMHQAAKDI TLDAGEFGVF IAGPSKTADI EQALVVGAHG
ACSLNVYLV