| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2904 |
|---|
| Symbol | |
|---|
| ID | 4479031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3474335 |
|---|
| End bp | 3475978 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639727510 |
|---|
| Product | L-lactate permease |
|---|
| Protein accession | YP_870537 |
|---|
| Protein GI | 117921345 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1620] L-lactate permease |
|---|
| TIGRFAM ID | [TIGR00795] L-lactate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0676147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.129872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAC TTCAACTCCT CGCCAGCTTG ACGCCAGTAA TCAGTGTAAT GATCTTTCTC
GTATTACTCA GAATGCCAGC GTCCAAAGCT ATGCCCATCT CCATGATAAT CACAGCGCTG
GCCGCCGTGT TTATTTGGCA AATGGATACC ACACTATTAG CCGCATCGGT TCTCGAAGGA
CTGCTGTCAG CCATCACCCC ATTAACCATC ATCTTCGGCG CGGTATTCCT GCTCAACACC
CTGAAATACT CAGGGGCAAT GGATACCATC CGCGCGGGCT TCACTAACAT CAGTGCCGAC
GCCCGTGTGC AGGTGATCAT CATCTGTTGG TTATTCGGAG CCTTTATCGA AGGTAGTGCG
GGCTTTGGGA CGCCCGCCGC GATTGGTGCA CCGCTGCTGG TATTACTGGG CGTTCCACCA
GTTGCCGCAG CCGTAGTGGC CTTGATTGCC GACTCAGCTT GTGTGTCCTT CGGTGCGATT
GGTTTACCCG TGCTATTTGG TATGGAGCAA GGTTTAACTC AAGGCGGTGT GAGCTTAGCA
GCTGAACAGT TTGCAGCCCA TGGCGGTAGC TACGTTGGTT ATGCTCGCTT TATCGTGATG
CATATGATCA CTATCGACTT AATTACAGGT ACCTTAATTC CACTGGTCAT GGTGACCATA
CTGACAGGAT TCTTCGGCCG CAATAAATCT TTTAAAGAAG GTTTAGCGAT TTGGAAATTT
GCGATTTTCG CCGGTCTTGC CTTTACCGTT CCTGCATGGA TTATCAACTA CCTTGCAGGT
CCTGAATTCC CATCTGTTAT CGGTTCATTG GTCGGTATGG CCTTAGTCAT CCCTGTTGCG
CGTAAAGGAT ACTTACTGCC CAAAACGCCT TGGAATGACT TTGCCGAAAA TGATAGCCAA
GAAGGTGCAA AAATTGAGAC GACTGCTAAG TTCTCACAAA TTGCCGCTTG GACACCTTAT
ATCATCATGG CTGCGCTATT AGTGCTTTCA CGCACTGTAG CACCACTCAA AGCCTGGTTA
TCTAGTTTCA ACATCAGCTG GACTGGCCTA ATGGGCACTG AGCTTAAAGC CAGCTTTGCG
ACCTTATATG CTCCTGGCGC CTTCTTCGTG GCCGTGTGTA TCTTAGGTTT CTTCCTGTTC
AAGATGAAAA GCCCTGCGAT TAAGCAATCC ATCGGCGTTT CATGCAAGTC TATGTTACCG
ACTATTATTT CATTAGGCGC ATCCGTGCCT ATGGTGAAAA TCTTCTTAAA CTCAGGTGTT
AATGGTGCAG GTCTTGCGTC TATGCCCGTC GCCTTAGCCG ATATGTTAGG CCAATCTATG
GGCGCGGTTT GGGCATGGAT GGCACCGATT GTGGGGATTT TTGGTGCCTT CCTGTCAGGT
TCAGCCACCT TCTCCAACAT GATGTTCTCC AGCCTGCAAT ACAGCGTGGC GGACAATATT
GGCATGAACC ATACACTGGT ATTAGCACTA CAAGGTATCG GTGCTAACGC CGGTAATATG
ATGTGTGTAA TGAACGTAGT GGCAGCCGCG ACCGTTGTGG GTATGGCGGG TAGAGAATCT
GAAATCATCC GTAAAACTAT GCCTGTTGCC ATTGGCTACG CGTTACTTGC AGGCACTATC
GCAACACTTT GGGGTGGCTT CTAA
|
|---|
| Protein sequence | MTILQLLASL TPVISVMIFL VLLRMPASKA MPISMIITAL AAVFIWQMDT TLLAASVLEG
LLSAITPLTI IFGAVFLLNT LKYSGAMDTI RAGFTNISAD ARVQVIIICW LFGAFIEGSA
GFGTPAAIGA PLLVLLGVPP VAAAVVALIA DSACVSFGAI GLPVLFGMEQ GLTQGGVSLA
AEQFAAHGGS YVGYARFIVM HMITIDLITG TLIPLVMVTI LTGFFGRNKS FKEGLAIWKF
AIFAGLAFTV PAWIINYLAG PEFPSVIGSL VGMALVIPVA RKGYLLPKTP WNDFAENDSQ
EGAKIETTAK FSQIAAWTPY IIMAALLVLS RTVAPLKAWL SSFNISWTGL MGTELKASFA
TLYAPGAFFV AVCILGFFLF KMKSPAIKQS IGVSCKSMLP TIISLGASVP MVKIFLNSGV
NGAGLASMPV ALADMLGQSM GAVWAWMAPI VGIFGAFLSG SATFSNMMFS SLQYSVADNI
GMNHTLVLAL QGIGANAGNM MCVMNVVAAA TVVGMAGRES EIIRKTMPVA IGYALLAGTI
ATLWGGF
|
|---|
| |