| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2902 |
|---|
| Symbol | |
|---|
| ID | 4479434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3471986 |
|---|
| End bp | 3472606 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639727508 |
|---|
| Product | heat shock protein GrpE |
|---|
| Protein accession | YP_870535 |
|---|
| Protein GI | 117921343 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000775754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0175654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG AGTCGATTAA AGCAGAACAG GATCTGATCC AAGAGGGTGT AGAGTCTGAA
GTTTCTACCG AAGAAGCGAG TCTGATTGAC GAGCTTACCC AAGCCAATTT CCGTATTGAA
GAGCTGGAAC AGTTACTCGC TGACGCTTTG GCGAAAGTTG AAGAGCAAAA AGATTCAGTT
ATCCGTGCTG CTGCCGAAGT AGACAACATT CGCCGCCGTG CTGCGATGGA TGTGGAAAAG
GCGAACAAGT TTGCATTGGA AAAATTCGCC AACGAATTAC TGCCAGTGTT AGACAATATG
GAACGTGCGC TGCAAGGTAC TAATCCACAG GATGAAACCA CCAAAGCACT GTTCGAAGGT
GTTGAGCTTA CGCAAAAGAG CTTCTTGACC GCCGTGGCTA AGTTTGGGGT AAAACCTATC
GATCCACAGG GGCAAGCCTT CAACCCTGAC CAACATCAAG CCATTGGTAT GCAGCCAAGC
GCTGAGTATC CAGCCAATAC TGTGATGTTA GTGATGCAAA AGGGTTATGA GCTGAACAGC
CGTTTACTGC GTCCTGCCAT GGTGATGGTG TCACAGGGCG GCCCTAGCCA AGAATCTGCT
TCAATCAACA TTGAAGCCTG A
|
|---|
| Protein sequence | MSNESIKAEQ DLIQEGVESE VSTEEASLID ELTQANFRIE ELEQLLADAL AKVEEQKDSV
IRAAAEVDNI RRRAAMDVEK ANKFALEKFA NELLPVLDNM ERALQGTNPQ DETTKALFEG
VELTQKSFLT AVAKFGVKPI DPQGQAFNPD QHQAIGMQPS AEYPANTVML VMQKGYELNS
RLLRPAMVMV SQGGPSQESA SINIEA
|
|---|
| |