Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2898 |
Symbol | |
ID | 4479430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3467743 |
End bp | 3468510 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727504 |
Product | flagellar motor protein PomA |
Protein accession | YP_870531 |
Protein GI | 117921339 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.141177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000842214 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATTTAG CTACAGTTAT AGGACTAGTC GGGGGCTTTG GTTTTATCCT TTGGGCTATG ATGACCAGCG GCGGCCTGGC AATCTTTATC GACGTCCCCT CAGTGTTTAT CGTATTCGGT GGTTCATTCT TCGTCGTAAT GATGAAATTC AATCTCAAAC AGTTTTTGGG CGCGGTAAAA ATTGCCGTCA AAGCCTTTAT GTTTAAGATT GATAAGCCTG AAGATCTTAT CGAACAATCC GTGACTATGG CGGACGCCGC CCGTAAAGGC GGATTCCTTG CCCTCGAAGA AGCGCAAATT TCCAACAGTT TTATGCAAAA AGCCGTCGAT ATGTTGGTCG ATGGTCACGA TGGTGAAGTG GTGCGCGCCG CACTTGAAAA AGACATTGCC CTCACCGAAG AGCGCCATCG CAACGGCATT GCGATTTTTA GGGCCTTTGG TGACGTTGGC CCCGCGATGG GGATGATTGG TACCTTAGTG GGCTTGGTGG CCATGTTATC CAATATGTCA GATCCTAAAT CGATTGGTCC TTCGATGGCA GTGGCCTTGT TAACGACGCT GTACGGCGCC GTGGTCGCCA ACATGGTGTG TATTCCCATT GCCGATAAAC TCACCCTGCG GATGGGTGAA GAAATGCTGA ACCGCAACCT GATTATGGAC GCGGTATTAG CGATTCAAGA TGGTCAAAAC CCGCGGGTGA TTGAAGGTTT CTTGAAGAAT TATCTTGCTG AAAAACAGCG GAAAATCGAT ACAACGGACG GAGAGTAG
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Protein sequence | MDLATVIGLV GGFGFILWAM MTSGGLAIFI DVPSVFIVFG GSFFVVMMKF NLKQFLGAVK IAVKAFMFKI DKPEDLIEQS VTMADAARKG GFLALEEAQI SNSFMQKAVD MLVDGHDGEV VRAALEKDIA LTEERHRNGI AIFRAFGDVG PAMGMIGTLV GLVAMLSNMS DPKSIGPSMA VALLTTLYGA VVANMVCIPI ADKLTLRMGE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN YLAEKQRKID TTDGE
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