Gene Shewana3_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2898 
Symbol 
ID4479430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3467743 
End bp3468510 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content49% 
IMG OID639727504 
Productflagellar motor protein PomA 
Protein accessionYP_870531 
Protein GI117921339 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.141177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000842214 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATTTAG CTACAGTTAT AGGACTAGTC GGGGGCTTTG GTTTTATCCT TTGGGCTATG 
ATGACCAGCG GCGGCCTGGC AATCTTTATC GACGTCCCCT CAGTGTTTAT CGTATTCGGT
GGTTCATTCT TCGTCGTAAT GATGAAATTC AATCTCAAAC AGTTTTTGGG CGCGGTAAAA
ATTGCCGTCA AAGCCTTTAT GTTTAAGATT GATAAGCCTG AAGATCTTAT CGAACAATCC
GTGACTATGG CGGACGCCGC CCGTAAAGGC GGATTCCTTG CCCTCGAAGA AGCGCAAATT
TCCAACAGTT TTATGCAAAA AGCCGTCGAT ATGTTGGTCG ATGGTCACGA TGGTGAAGTG
GTGCGCGCCG CACTTGAAAA AGACATTGCC CTCACCGAAG AGCGCCATCG CAACGGCATT
GCGATTTTTA GGGCCTTTGG TGACGTTGGC CCCGCGATGG GGATGATTGG TACCTTAGTG
GGCTTGGTGG CCATGTTATC CAATATGTCA GATCCTAAAT CGATTGGTCC TTCGATGGCA
GTGGCCTTGT TAACGACGCT GTACGGCGCC GTGGTCGCCA ACATGGTGTG TATTCCCATT
GCCGATAAAC TCACCCTGCG GATGGGTGAA GAAATGCTGA ACCGCAACCT GATTATGGAC
GCGGTATTAG CGATTCAAGA TGGTCAAAAC CCGCGGGTGA TTGAAGGTTT CTTGAAGAAT
TATCTTGCTG AAAAACAGCG GAAAATCGAT ACAACGGACG GAGAGTAG
 
Protein sequence
MDLATVIGLV GGFGFILWAM MTSGGLAIFI DVPSVFIVFG GSFFVVMMKF NLKQFLGAVK 
IAVKAFMFKI DKPEDLIEQS VTMADAARKG GFLALEEAQI SNSFMQKAVD MLVDGHDGEV
VRAALEKDIA LTEERHRNGI AIFRAFGDVG PAMGMIGTLV GLVAMLSNMS DPKSIGPSMA
VALLTTLYGA VVANMVCIPI ADKLTLRMGE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN
YLAEKQRKID TTDGE