Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2896 |
Symbol | |
ID | 4479428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3465148 |
End bp | 3466602 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639727502 |
Product | thiamine biosynthesis protein ThiI |
Protein accession | YP_870529 |
Protein GI | 117921337 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0805298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000321051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTTTA TTGTAAAGCT GTACCCAGAA ATCATGATGA AGAGCAAGCC CGTGCGCATG CGCTTCACCA AAATGCTTGA AACCAACATC CGTAACGTGC TCAAAAAAGT TGATGAAGAT GCCAAAGTGC AACGTCAATG GGACCGTATT TGGGTAAAGG TGCCAAATGA TAAACCTGAA TTAGCTCAGG CCTTTGGTGA GCGTTTAGCC TGTATTCCTG GGATCGCCCA TGTGGTGCAA GTGGATGAAT ACAGCTTTAC CTCTGTTGAC GATATCTACC AACAAGTCTT ACCCGTTTAC CGTGACCAAA TTGCCGGTAA AACCTTCTGT GTGCGCGTCA AACGCACTGG CTCACACGAT TTTAACTCTA TCGAAGTCGA GCGTTATGTC GGTGGTGGTT TAAACCAGTT TACCGATGCG ATTGGCGTGC GTTTGAAGAA CCCAGAAGTG ACAGTTAACC TCGAAATCGA GGGCGATAAA CTGTATATGG TGACTAAGCG TATCGAAGGC TTAGGCGGCT TCCCAATGGC GACGCAGGAA GATGTGTTGT CCTTGATTTC AGGCGGTTTT GACTCAGGCG TGTCGAGCTA CCAATTTATT AAGAAGGGCG CTCGTACCCA TTACTGTTTC TTCAACCTCG GTGGCGCGCA GCATGAAATT GGCGTGAAAC AAGTCGCTTA CCATTTGTGG AAAACCTATG GTGAATCCCA CAAGGTGAAG TTTGTGTCAG TGCCGTTCGA GCCTGTGGTG GCCGAGATTT TAGAGAAAAT CGACAACGGT CAAATGGGCG TGGTGCTCAA GCGTATGATG ATGCGCACTG CGGCGCGTAT TGCCGAGCGT ATGGGCATTC AGGCGATTGT GACAGGTGAG AGTTTAGGCC AAGTATCGAG CCAAACCTTA ACCAACTTAA ACGTGATTGA CCGCTGCACC GATATGCTGA TCCTGCGCCC GCTGATCGCC ATGGATAAGC AGGACATCAT CAACGAATGC CGCCGTATCG GCACCGAGGA TTTTGCTAAA TCTATGCCCG AGTATTGTGG CGTGATTTCG CAAAAGCCAA CCGTGAAGGC GGTACTGGCC AAGGTTGAGG CCGAAGAGAC CAAATTCTCT GAGGACTTGA TTGACCGTAT CGTTGAGCAG GCCGTGGCCA TTGATATCAG GGAGATAGCA GAACAAATGA ATACGCGTAT CACTGAAACT GAAACCGTTG TTGCTATCGA CACCAATGAA GTGGTGATTG ATATTCGTGC CCCTGAGGAA GAAGAGAACA AGCCGCTGGA GATTGAAGGC GTGGAAATCA AGCGCATTCC TTTCTTCAAA TTAGCGACTC AATTTGCCGA TCTCGATAAG CAGAAGACTT ACCTGTTGTA CTGTGAGCGT GGGGTGATGA GTAAATTACA GGCGCTATAC CTGATTGAAC AAGGTTATCA CAATGTTAAG GTTTACCGCC CTTAA
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Protein sequence | MKFIVKLYPE IMMKSKPVRM RFTKMLETNI RNVLKKVDED AKVQRQWDRI WVKVPNDKPE LAQAFGERLA CIPGIAHVVQ VDEYSFTSVD DIYQQVLPVY RDQIAGKTFC VRVKRTGSHD FNSIEVERYV GGGLNQFTDA IGVRLKNPEV TVNLEIEGDK LYMVTKRIEG LGGFPMATQE DVLSLISGGF DSGVSSYQFI KKGARTHYCF FNLGGAQHEI GVKQVAYHLW KTYGESHKVK FVSVPFEPVV AEILEKIDNG QMGVVLKRMM MRTAARIAER MGIQAIVTGE SLGQVSSQTL TNLNVIDRCT DMLILRPLIA MDKQDIINEC RRIGTEDFAK SMPEYCGVIS QKPTVKAVLA KVEAEETKFS EDLIDRIVEQ AVAIDIREIA EQMNTRITET ETVVAIDTNE VVIDIRAPEE EENKPLEIEG VEIKRIPFFK LATQFADLDK QKTYLLYCER GVMSKLQALY LIEQGYHNVK VYRP
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