| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2886 |
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| Symbol | xni |
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| ID | 4478761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3454115 |
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| End bp | 3454897 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727492 |
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| Product | exonuclease IX |
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| Protein accession | YP_870519 |
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| Protein GI | 117921327 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000113102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAATAAGT TTTTAATTAT CGATGGTCTC AACTTAGTTC GCCGGATTTA TGCGGCGATC
CCAGATGAGA ACGATATGGA CAGTTTAACG GAGCGTGTGA GTGTCGCCTG CACTAAACTG
CTGCGCATTC ACCACCCAAC CCATGTCACT ATCGTCTGGG ATGGTGATGA GATGTCTTGG
CGAAAACAGC TTTATCCCGA TTATAAAAAG GGCCGTAAAC CTATGCCAGA GCCTCTGGCC
GCGGGCTTAC CTGCACTGCA GGAACACCTT AAAAGCGTAC AAATCCAATC AATTTATGCC
GCCGCCGAAG CCGATGATGT TATCGCCACC CTTGCGATGA AAACCGCCAA AGCCCAAGGT
GAAGCCGTTA TCGTGTCGAC CGATAAAGGC TTTAGCCAAC TCAATCATCC GCGTATCAGT
CAATGGGATC ATTTTAATCA GCAATACCTC AACATCACAG AGCTTGAGCA AAAGCTCGGA
GTCGATCGTA GCCAATTTCT TGATTTACTG GCGCTGGCGG GTGATAGCGG TAATAAAATC
CCCGGTATCG CAGGCATAGG CCCCAAATCA GCGGCTGAGT TGCTGCGAAC CTTCAGAACC
TTAGCGGCGT TGTTTTCTTC TCTGCCCAAT CTTGGCGCGA AACAAGCTAA GAAGCTGGCC
GAAGGACGAG ATATGGCTCG CCTCAGTTAT AAATTAGCCC AATTGCAAAT CGATTTGCCC
TTAAACATCA ACCTCAAGGA TTTTAGGGTC AATGGCCCCG CCACTACGCC GCAGCTCGAT
TAA
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| Protein sequence | MNKFLIIDGL NLVRRIYAAI PDENDMDSLT ERVSVACTKL LRIHHPTHVT IVWDGDEMSW
RKQLYPDYKK GRKPMPEPLA AGLPALQEHL KSVQIQSIYA AAEADDVIAT LAMKTAKAQG
EAVIVSTDKG FSQLNHPRIS QWDHFNQQYL NITELEQKLG VDRSQFLDLL ALAGDSGNKI
PGIAGIGPKS AAELLRTFRT LAALFSSLPN LGAKQAKKLA EGRDMARLSY KLAQLQIDLP
LNINLKDFRV NGPATTPQLD
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