Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2885 |
Symbol | |
ID | 4478760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3452745 |
End bp | 3454100 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727491 |
Product | hypothetical protein |
Protein accession | YP_870518 |
Protein GI | 117921326 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000717465 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAGTAA AAGTCAGCCC AAAGGGCAGC ATGGATCAGC TTTCACAACT CGAAGTTGAT CGCCTCAAAA AAAGCGCCAA GAGCGCCCTA TATCAACTGT ATCGTAACTG CTCACTCGCC GTACTCGCCG CAGGCCTTAA GACCGACAAT TCTAAAGCAC TTTTCGAGCA ATACCAGAGC TTCGATATCA ATGTGTTGCA ACGTGAACGC GGGGTTAAGC TAGAGCTTAT CAATCCCCCT GAACAAGCCT TTGTCGACGG CCAAATTATC ACCGGGATCC AAGAACACTT ATTTTCGGTG CTGCGGGATA TCCTCTACAT CAGCGATAAG TACGACACCC TTAAACATAT CAATCTGACC AACGCCAGCC ACATTACAAA CGTAGTGTTC GATATTTTGC GTAACGCCCG CGCCATCGCA CCGATGAAAG ACCCCAATGT GGTCGTCTGT TGGGGCGGCC ACAGTATTAA TGCCGTCGAA TACCAATACA CCCGCGAGGT GGGTTATCAG CTCGGCCTAA GGGAACTCGA TATTTGCACC GGCTGTGGCC CAGGCGCGAT GGAAGGCCCA ATGAAGGGCG CCGCCATTGG ACATGCGAAA CAACGGATTA AAAATGCCCG CTATATTGGT CTTACTGAGC CGAGTATTAT TGCCGCCGAG CCGCCTAACC AAATTGTGAA CGAGCTGGTG ATTTTGCCCG ATATCGAAAA ACGCCTTGAA GCCTTCGTGC GCTTAGGCCA TGGCATTATT ATCTTCCCCG GCGGCGCGGG TACCGCCGAA GAGCTACTGT ATATTCTGGG GATTTTGCTC AATAAAGAAA ATCAGGAAAC CCCCTTCCCA CTGGTACTGA CGGGTCCCAG TGAGAGCGCG GATTATTTTA TTAAAATTGA TGAGTTTATC GCCGCCACCT TAGGAGCCGA GGCGCAGCAA AAATATCAAA TCATCATAGA CAATCCCGCC GAAGTCGCCC GAGTGATGAA GCAAGGCATG GAACAAGTGA AAAACCATCG CCGCGCCACC GGCGATGCCT ATCAATATCA ATGGGGACTG AAGATAGAAC CCGAGTTCCA ACTGCCGTTT ATCCCCAGTC ATGAGGTGAT GGCTAACTTA TATTTACATT TTCAAGCGAA TAAAGCGGAA TTAGCCGCTA ATTTACGCAA AGCGTTTTCG GGTATCGTGG CAGGTAATGT AAAATCAGAC ACCATCAAGC AGATTGAGCA CTTAGGCCCC TTCCACATAA AAGGGGACCC ACATTTAATG GAGCTGATGG ACAATTTGCT GGGGGCCTTT GTCGCCCAAC ATAGGATGAA ACTGCCGGGA AGCGCTTATA TTCCCTGCTA TCAAATAGTG AAGTAA
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Protein sequence | MIVKVSPKGS MDQLSQLEVD RLKKSAKSAL YQLYRNCSLA VLAAGLKTDN SKALFEQYQS FDINVLQRER GVKLELINPP EQAFVDGQII TGIQEHLFSV LRDILYISDK YDTLKHINLT NASHITNVVF DILRNARAIA PMKDPNVVVC WGGHSINAVE YQYTREVGYQ LGLRELDICT GCGPGAMEGP MKGAAIGHAK QRIKNARYIG LTEPSIIAAE PPNQIVNELV ILPDIEKRLE AFVRLGHGII IFPGGAGTAE ELLYILGILL NKENQETPFP LVLTGPSESA DYFIKIDEFI AATLGAEAQQ KYQIIIDNPA EVARVMKQGM EQVKNHRRAT GDAYQYQWGL KIEPEFQLPF IPSHEVMANL YLHFQANKAE LAANLRKAFS GIVAGNVKSD TIKQIEHLGP FHIKGDPHLM ELMDNLLGAF VAQHRMKLPG SAYIPCYQIV K
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