Gene Shewana3_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2885 
Symbol 
ID4478760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3452745 
End bp3454100 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content49% 
IMG OID639727491 
Producthypothetical protein 
Protein accessionYP_870518 
Protein GI117921326 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000717465 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAGTAA AAGTCAGCCC AAAGGGCAGC ATGGATCAGC TTTCACAACT CGAAGTTGAT 
CGCCTCAAAA AAAGCGCCAA GAGCGCCCTA TATCAACTGT ATCGTAACTG CTCACTCGCC
GTACTCGCCG CAGGCCTTAA GACCGACAAT TCTAAAGCAC TTTTCGAGCA ATACCAGAGC
TTCGATATCA ATGTGTTGCA ACGTGAACGC GGGGTTAAGC TAGAGCTTAT CAATCCCCCT
GAACAAGCCT TTGTCGACGG CCAAATTATC ACCGGGATCC AAGAACACTT ATTTTCGGTG
CTGCGGGATA TCCTCTACAT CAGCGATAAG TACGACACCC TTAAACATAT CAATCTGACC
AACGCCAGCC ACATTACAAA CGTAGTGTTC GATATTTTGC GTAACGCCCG CGCCATCGCA
CCGATGAAAG ACCCCAATGT GGTCGTCTGT TGGGGCGGCC ACAGTATTAA TGCCGTCGAA
TACCAATACA CCCGCGAGGT GGGTTATCAG CTCGGCCTAA GGGAACTCGA TATTTGCACC
GGCTGTGGCC CAGGCGCGAT GGAAGGCCCA ATGAAGGGCG CCGCCATTGG ACATGCGAAA
CAACGGATTA AAAATGCCCG CTATATTGGT CTTACTGAGC CGAGTATTAT TGCCGCCGAG
CCGCCTAACC AAATTGTGAA CGAGCTGGTG ATTTTGCCCG ATATCGAAAA ACGCCTTGAA
GCCTTCGTGC GCTTAGGCCA TGGCATTATT ATCTTCCCCG GCGGCGCGGG TACCGCCGAA
GAGCTACTGT ATATTCTGGG GATTTTGCTC AATAAAGAAA ATCAGGAAAC CCCCTTCCCA
CTGGTACTGA CGGGTCCCAG TGAGAGCGCG GATTATTTTA TTAAAATTGA TGAGTTTATC
GCCGCCACCT TAGGAGCCGA GGCGCAGCAA AAATATCAAA TCATCATAGA CAATCCCGCC
GAAGTCGCCC GAGTGATGAA GCAAGGCATG GAACAAGTGA AAAACCATCG CCGCGCCACC
GGCGATGCCT ATCAATATCA ATGGGGACTG AAGATAGAAC CCGAGTTCCA ACTGCCGTTT
ATCCCCAGTC ATGAGGTGAT GGCTAACTTA TATTTACATT TTCAAGCGAA TAAAGCGGAA
TTAGCCGCTA ATTTACGCAA AGCGTTTTCG GGTATCGTGG CAGGTAATGT AAAATCAGAC
ACCATCAAGC AGATTGAGCA CTTAGGCCCC TTCCACATAA AAGGGGACCC ACATTTAATG
GAGCTGATGG ACAATTTGCT GGGGGCCTTT GTCGCCCAAC ATAGGATGAA ACTGCCGGGA
AGCGCTTATA TTCCCTGCTA TCAAATAGTG AAGTAA
 
Protein sequence
MIVKVSPKGS MDQLSQLEVD RLKKSAKSAL YQLYRNCSLA VLAAGLKTDN SKALFEQYQS 
FDINVLQRER GVKLELINPP EQAFVDGQII TGIQEHLFSV LRDILYISDK YDTLKHINLT
NASHITNVVF DILRNARAIA PMKDPNVVVC WGGHSINAVE YQYTREVGYQ LGLRELDICT
GCGPGAMEGP MKGAAIGHAK QRIKNARYIG LTEPSIIAAE PPNQIVNELV ILPDIEKRLE
AFVRLGHGII IFPGGAGTAE ELLYILGILL NKENQETPFP LVLTGPSESA DYFIKIDEFI
AATLGAEAQQ KYQIIIDNPA EVARVMKQGM EQVKNHRRAT GDAYQYQWGL KIEPEFQLPF
IPSHEVMANL YLHFQANKAE LAANLRKAFS GIVAGNVKSD TIKQIEHLGP FHIKGDPHLM
ELMDNLLGAF VAQHRMKLPG SAYIPCYQIV K