| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2883 |
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| Symbol | |
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| ID | 4478758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3448820 |
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| End bp | 3450982 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639727489 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_870516 |
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| Protein GI | 117921324 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.897775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000211929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTAAAT TCATTGTTAT TTTCGTGACC TTGTTGATGT CTATTTCGTT TCAAACACAG
GCTGCCGATC TCGAAGCCGA AGAAATAGAA TTGCGTGAAA CGCCACAGAA GATGTACGAC
AGGCTCAATC AATCCCTTTC TTTTCCTATC GCCTTTAAGA CCCGCGAACA GTTTGAACGT
GCTGCCCAAG AGCAGGGCTA CAGCAGCGAT GAATTCGAGC ATATTTTGCA GCTACTGGCG
CGATTGAATA TGGAGCCGAA TGTAAAATCT AAGGTCGGGT TTCAAGACGC TAATACCCTT
ATCGAATTGC TTGCAAGCAT AGCGCAAACG CCGTTCGAGC AAGCCACGGT CGCCATGTTA
AAGGGCCGCT ATATAGGCCG CACCGAGCAA AAATACCAAG AAGCCATCGC CTTTTATAAT
GAGGCGCTGA CACGGATTAA CGACAGTTAC GATGTCGAGT CCATGCTGCT CAAGCACACA
ATTCATGAAC ACTTAGGCGG TTTGCACCTC GTTATCCGTC AGGATGTGCC TGCCTTAATG
CATTTTCATA CCTATCGCGA TATCGCCTAC AAACTCAGGA ACGATTATTT GATTGCGGCG
GCCGAGTCAA AGCTCGGGCA TTATTACAAT AAAAATCAGC AACTCACTAA GTCATTACAA
CACTATAGCG AAGCGATTCG CCTATCTAAT CGCTCCAATT ATCCTTCGAT GAAGACCCAT
CTGCAGCTAC AACTGGCGAA GGTCTATCGG GATTTAAAAC AATGGGATGA AGCCTTAAAG
AATGCCCATG AGGCCGCCGC TGGCTTTAAA AAACTGGGCA ACGACACTTA TCTGTCCAGC
TGTATGACGG TCATCGCCAT GGTGTATGGC GAACAAGGGG ATTGGAACCG CGCCATCGAT
TACTATCTCA ATGCCCAGCA GCTCGATGCT AAACGCGGTA ACTACATCGC TCAAGGGTTG
AACTTCCATA ATCTCGGCCA AGCCTATTCG CACTTAGATG ACGAGGCAAA CGCCCTCAAA
TATTTACTGA TGGCGAACCA AATCTTTGTT GAAAAACAAA GTCATCACTA TTTAGTTTAT
AACGAGCTAC TGATCGGTGA GATAGCCCAA GCTAAGGAAG ATTGGTCGCT GATGATGAGC
CATGCCGAAA ACGCTTTGGC CCTAGCGACC GATTTAAAAT TGCAAGATGA GCAAAAGTCG
GCACTGACGC AAATCGCCCT GTCGGCGGAA AAACTTAACG ATCAAGCCAA GGTGATAAGC
ACACAAAAAC GCATTATCGA ATTAAGCCAA GCATCCGAAA ATACCGCGCA GGACTCGTCG
GTATCTTCCT CAGTACTGGC CGAGCAGCAA CTCAAACTTG AGCTCAGTAT GCTACAGGGC
AAACTGAACG ATGCGATTGA AACCACTAAA AATACCAACA AGTTGCTTGC CTTGAGTGGT
CTTATCGCCA CGCTACTCTT AGTGGGAATA GTTATCCTAT TAAATCAACG CCGTAAAACG
AGGCGCCAAA ACGCAGCCTT ACTCGCAGTA AGTTTGCAGG AGCCTTTTAC TCAGCATCAA
GGCTATGCCG CACTCTTAAA GGATCTGGCT CAGCCTCCTG CGAATGCGTC CACTACTGCC
CTCGCCTTGA TTGAATTTGG CGAACACGTC AATACCGATC TGAATCACGG CCAATACTTT
GCTAATGCTA TTACCCAACA ATTGACTCAC CATATAGGCA ATAGTCTATT AATGCCCGTC
TATGTGATCC GCCAAGGCTT ATTTGCCGTA AGATTTACTG AGGCGCTAGA GCCGCAGCAA
GTATTACACA CGCTGCGTAG ATACCTTGAT GGCAAAGGCT TAAGCCATAG CTTTAACCTT
GGCTTGATTA ATTTGCCTCT GCTAGCCAAA GCAGAAATTA AAATCGCCCC CAAATTACTG
TTTGAAACAG TGCAAATGGC ATTGGCGGGT GCCCGAAGTT TACCGAATGA TACCAGCCAT
TATGTGTGCC TAAGGGCCTT GGATTTTGTA CCGCCAACAC TCTTTGCAAA CCCGCTATTC
TTGCACTTGG AGAAAGGGAT TGAGCGCGGC CTTATTCGAG TCGACACCGA TGCACCTAAG
GAGCAGATTG CCTGGCCCTG CTGGGAAAAC AACCAAGATA GGCATTTATT GGAAAATATT
TGA
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| Protein sequence | MRKFIVIFVT LLMSISFQTQ AADLEAEEIE LRETPQKMYD RLNQSLSFPI AFKTREQFER
AAQEQGYSSD EFEHILQLLA RLNMEPNVKS KVGFQDANTL IELLASIAQT PFEQATVAML
KGRYIGRTEQ KYQEAIAFYN EALTRINDSY DVESMLLKHT IHEHLGGLHL VIRQDVPALM
HFHTYRDIAY KLRNDYLIAA AESKLGHYYN KNQQLTKSLQ HYSEAIRLSN RSNYPSMKTH
LQLQLAKVYR DLKQWDEALK NAHEAAAGFK KLGNDTYLSS CMTVIAMVYG EQGDWNRAID
YYLNAQQLDA KRGNYIAQGL NFHNLGQAYS HLDDEANALK YLLMANQIFV EKQSHHYLVY
NELLIGEIAQ AKEDWSLMMS HAENALALAT DLKLQDEQKS ALTQIALSAE KLNDQAKVIS
TQKRIIELSQ ASENTAQDSS VSSSVLAEQQ LKLELSMLQG KLNDAIETTK NTNKLLALSG
LIATLLLVGI VILLNQRRKT RRQNAALLAV SLQEPFTQHQ GYAALLKDLA QPPANASTTA
LALIEFGEHV NTDLNHGQYF ANAITQQLTH HIGNSLLMPV YVIRQGLFAV RFTEALEPQQ
VLHTLRRYLD GKGLSHSFNL GLINLPLLAK AEIKIAPKLL FETVQMALAG ARSLPNDTSH
YVCLRALDFV PPTLFANPLF LHLEKGIERG LIRVDTDAPK EQIAWPCWEN NQDRHLLENI
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