| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2882 |
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| Symbol | |
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| ID | 4478757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3446868 |
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| End bp | 3448679 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727488 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_870515 |
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| Protein GI | 117921323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0208094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000100576 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACCCA GTAGATTATC TGTTTTGATA TTAAGTGCAT TAGGTTCGAC AACTGTTTTA
GCCGATGTAG ATTATAAAAT TGATTTAAGC CAGCCAGAAC ATCACCTTGC GCAGGTGAGT
GTGACTTTTC CCGAAGCTAA CGCGGGTGAG TTAACGGTTA ATCTTCCCGT GTGGCGTACG
GGTAAATATC AAGTATTGCC CCTATCCGAT GGTGTGCGTT TATTTACCGC GAAAGACAGT
CAAGGCAACA GTCTTCCATG GAAACGTAGC GCCAGTGGCG AGTGGCAAAT AGCCCTCGAT
AAACCCGCCA GTGTGACTGT TAGCTATCAA TTATATGCTA ATGAATTAGG TCAACGTGTG
CGTCATATCG ATGCGAGCCA CGCTTATCTC GATGCCAGTG GCGTATTTAT GTATAGCCCG
CAATTTCGGA CAGATCCAGT GGCCGTGCAG TTAACGGTTC CCGAAAATTG GCAGAGTTAT
TCCGGTATGT CATCGGGCAA CGCGGCGCAC TCTTTCGTTG CCCCCAATTA TGATGTGTTG
ATTGATTCCC CTATCGAAAC GGGAGTGAGT CTACACAAGC AATTCAGTGC CAACGACAAA
GACTATGAAC TCGTGTTTTG GGGCGAAGGC AACTACGATG CCGATAAGGT AGTGAAAGAC
TTAACCGCAT TGAGTGGCCA AGCCAAGGCG ATTTGGGATG GTTATCCCTT TGAGCGTTAT
GTGTATATGG TGCATGCCAC CAGTGGTGCG GGCGGCGCGA CCGAGCACTT AAACTCAACG
GTTATTCAGC TGCCGCGCTT TAGTTTTCGT GAGCGTAAGG ATTACCTACG CTTTATTAGC
ACGGCGTCCC ATGAGTTTAT TCATACTTGG AACGTTAAAG CCTATCGTCC GGCTGGTTTG
GTCCCCTACG ATTATCAGCA TGAAAACATG ACCGAACTGT TGTGGATTGC CGAGGGCTCT
ACCAGTTATT TCCAAGGTCA GTTATTGCTG CGTGCGGGCG TGATGACACC TAAGGAATTT
TTAGAAGACC TCGCCAAACG CATCGAGAAG AGTGAGCTAA CACCGGGGCG CGAAATTCAA
TCTGTGGCCG AGGCCAGTTT AGGGGAGTGG AGCAGCACGG GTGGTGATTA TGCTATTAAC
CACAGTGTGA ATATTTACTC CGAGGGTTAT TTAGCCTCAC TGGCGCTGGA TTTCTCCCTG
CTGACGGATT CGAAGCTCGC CCACTCGTAC CGAGATGTGC ACCGTAAGCT CTATCAGGAT
TACCGCGTGC CCAAGGGCTA CACTGTGAGT GATGTAAAGC AGATCCTGAA GGACTTATCG
GGTAAGGATT ATGGGCCGTG GTGGCAGAGC CATGTGAATA GTCCGCTGAG CCTTGAGTTT
TCAAGCCTGT TGTCTCAGGC GGGATTAGTG ATGTCCTACG GTAAAGACTC CAAAGCTGAG
CCATTTACTG GCATGACTTT AAGTAGCGAG CATGGCTCTT TAGTGCTTTC TCAAGTCTTG
CGTAACGGCC CCGCTTGGCA GGCTGGTATT GTGGCAGGGG ATGAGATCCT CGCGATTAAT
GGTTTAAAGG TCACGGCACA AGGTTTTGAT AAACGCATTA AAGACTTTAA AGTGGGTGAT
AAAGTTGAAA TCACCTTATT TAACAACGAC AAAATCAAGC AAGTGGCGTT AACCTTAGGT
GAGAAACAAA GCGGTAAGCT AGTGCTAAAA GGCGATGCAA AGGCGACTAA GCAGCAAAAA
GCCTTCTTCA AAGCCTGGCT TGGCATTGAT TGGCCGTTCG ATAATAAAGG TGAGCTGCTG
GCGAAAAGCT AG
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| Protein sequence | MKPSRLSVLI LSALGSTTVL ADVDYKIDLS QPEHHLAQVS VTFPEANAGE LTVNLPVWRT
GKYQVLPLSD GVRLFTAKDS QGNSLPWKRS ASGEWQIALD KPASVTVSYQ LYANELGQRV
RHIDASHAYL DASGVFMYSP QFRTDPVAVQ LTVPENWQSY SGMSSGNAAH SFVAPNYDVL
IDSPIETGVS LHKQFSANDK DYELVFWGEG NYDADKVVKD LTALSGQAKA IWDGYPFERY
VYMVHATSGA GGATEHLNST VIQLPRFSFR ERKDYLRFIS TASHEFIHTW NVKAYRPAGL
VPYDYQHENM TELLWIAEGS TSYFQGQLLL RAGVMTPKEF LEDLAKRIEK SELTPGREIQ
SVAEASLGEW SSTGGDYAIN HSVNIYSEGY LASLALDFSL LTDSKLAHSY RDVHRKLYQD
YRVPKGYTVS DVKQILKDLS GKDYGPWWQS HVNSPLSLEF SSLLSQAGLV MSYGKDSKAE
PFTGMTLSSE HGSLVLSQVL RNGPAWQAGI VAGDEILAIN GLKVTAQGFD KRIKDFKVGD
KVEITLFNND KIKQVALTLG EKQSGKLVLK GDAKATKQQK AFFKAWLGID WPFDNKGELL
AKS
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