Gene Shewana3_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2872 
Symbol 
ID4478747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3434896 
End bp3435435 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content47% 
IMG OID639727478 
ProductYfaZ family protein 
Protein accessionYP_870505 
Protein GI117921313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00022374 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00192784 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAGT TCAGAGTAGC AAGTGTCTTA TTATTGAGTG CAGCCGCACT GCAGGTGAAT 
GCGTCAGAAT TTAATCTTGG GTTAAACAAC GATGTGGTTT CTACCGAGTT AGAGCTGCAA
GTGAATAAAG ATGTCAATGC AGTATTAGGA TATATTTATT CAGACGACAG TGGTCATATT
GCCCAAGGCG CAATGCACAT GACCCATGAT GTTGGCGTAC ACCACTTCGA AGTCGGTGCT
AAGTTAAGCC AGTTATGGGC AGATGATGCG CCAAACGGCA GTGCCGTGTC CGTGGGCGGT
CGTTATGCCT TGGCGTTAGG GCCAAATATC TCTTTGCATG CCGCCGCTTA CTATGCGCCA
TCGGTATTGT CTTTCGGTAA TGTCGATGGT CAATACGAGT TAGATTCAAA GGTGCAGTAC
CGCGTGAACC CTAATATGGC GTTCTATGTG GGTTACCGTA AGATTGCCTT CGAATATGAT
CACGCCCGTG ACTTTACCTT CGAAGATGGC GTTTATATCG GCGGTAAATT CCGCTTCTAA
 
Protein sequence
MAKFRVASVL LLSAAALQVN ASEFNLGLNN DVVSTELELQ VNKDVNAVLG YIYSDDSGHI 
AQGAMHMTHD VGVHHFEVGA KLSQLWADDA PNGSAVSVGG RYALALGPNI SLHAAAYYAP
SVLSFGNVDG QYELDSKVQY RVNPNMAFYV GYRKIAFEYD HARDFTFEDG VYIGGKFRF