Gene Shewana3_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2871 
Symbol 
ID4478746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3433991 
End bp3434842 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content47% 
IMG OID639727477 
Producthypothetical protein 
Protein accessionYP_870504 
Protein GI117921312 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0538592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00207422 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACCAT TATTGATGAT TTTAGCTGCA CAATTATTGA TTGCCAGCGG CAACCTATTG 
GTTAAGTTGC TTGAAACCAA TGCGCCCGTA TTTCAACTTG TGCTTTATCG CCAATTATTT
GCCACGCTTT TGGTGCTTCC CTTTGTCTGG CGCCTACAGG GGAACCTTAA GTTAAGCCCC
TTCTACAAAG TGCACTTAAG CCGAGCGCTG TTAATCGGCT TAGGCAATGC CATCTTTATG
CTGGCGGTAT TACACTTACC ACTCGCAACC GTGACGGCGG TGATCTATAC CTCGCCATTG
TTACTGTTGC TGATGTCCGC CTTCTTTTTA AATGAGCGTA TTGGTTATCG TCGCACCGTT
GCGGGGATTA TTGGTTTTAC GGGCATTTTG CTGATAAGTC AGCCGACGGA ATTTAACCTC
TATATCGGTC TAGCCTTTTT TGGTGCCATG ACTTCGGCAA CAAACAGCCT GATTTTGAAG
GCATATTCAA CCCATGAGCA TCCCTTTTCA ACACTCTTTT GGTCTAATGC CTTTGCGATG
GTTTTTCTGA TACCGGCAAC TTGGTACGAG GGTGCCGACT TTAGCCTGCC CGTTGCCCAA
GTTGGCTTAA CCTTAGGGCT GTTTTATATT GGTATGACCT ACCTCATCAT CCACGCCTAT
CGGCGCGCCG ATGCCAGCCA AATGGCCCCA GTGGAATACA CAGGCCTTAT TTTTGCCGCA
TTGTTTGGTT GGTGGTTTTT GGATGAGCAC TTAAGCATTG TGGTGTGTAT TGGCATAGGA
CTGGTGATTT TTTCCTCCAT CCTGCCAAGC TACAGTGAAC TGAAAGCCAA ATGGAAAAGC
CGGCGAAGTT AA
 
Protein sequence
MAPLLMILAA QLLIASGNLL VKLLETNAPV FQLVLYRQLF ATLLVLPFVW RLQGNLKLSP 
FYKVHLSRAL LIGLGNAIFM LAVLHLPLAT VTAVIYTSPL LLLLMSAFFL NERIGYRRTV
AGIIGFTGIL LISQPTEFNL YIGLAFFGAM TSATNSLILK AYSTHEHPFS TLFWSNAFAM
VFLIPATWYE GADFSLPVAQ VGLTLGLFYI GMTYLIIHAY RRADASQMAP VEYTGLIFAA
LFGWWFLDEH LSIVVCIGIG LVIFSSILPS YSELKAKWKS RRS