Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2871 |
Symbol | |
ID | 4478746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3433991 |
End bp | 3434842 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727477 |
Product | hypothetical protein |
Protein accession | YP_870504 |
Protein GI | 117921312 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0538592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00207422 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACCAT TATTGATGAT TTTAGCTGCA CAATTATTGA TTGCCAGCGG CAACCTATTG GTTAAGTTGC TTGAAACCAA TGCGCCCGTA TTTCAACTTG TGCTTTATCG CCAATTATTT GCCACGCTTT TGGTGCTTCC CTTTGTCTGG CGCCTACAGG GGAACCTTAA GTTAAGCCCC TTCTACAAAG TGCACTTAAG CCGAGCGCTG TTAATCGGCT TAGGCAATGC CATCTTTATG CTGGCGGTAT TACACTTACC ACTCGCAACC GTGACGGCGG TGATCTATAC CTCGCCATTG TTACTGTTGC TGATGTCCGC CTTCTTTTTA AATGAGCGTA TTGGTTATCG TCGCACCGTT GCGGGGATTA TTGGTTTTAC GGGCATTTTG CTGATAAGTC AGCCGACGGA ATTTAACCTC TATATCGGTC TAGCCTTTTT TGGTGCCATG ACTTCGGCAA CAAACAGCCT GATTTTGAAG GCATATTCAA CCCATGAGCA TCCCTTTTCA ACACTCTTTT GGTCTAATGC CTTTGCGATG GTTTTTCTGA TACCGGCAAC TTGGTACGAG GGTGCCGACT TTAGCCTGCC CGTTGCCCAA GTTGGCTTAA CCTTAGGGCT GTTTTATATT GGTATGACCT ACCTCATCAT CCACGCCTAT CGGCGCGCCG ATGCCAGCCA AATGGCCCCA GTGGAATACA CAGGCCTTAT TTTTGCCGCA TTGTTTGGTT GGTGGTTTTT GGATGAGCAC TTAAGCATTG TGGTGTGTAT TGGCATAGGA CTGGTGATTT TTTCCTCCAT CCTGCCAAGC TACAGTGAAC TGAAAGCCAA ATGGAAAAGC CGGCGAAGTT AA
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Protein sequence | MAPLLMILAA QLLIASGNLL VKLLETNAPV FQLVLYRQLF ATLLVLPFVW RLQGNLKLSP FYKVHLSRAL LIGLGNAIFM LAVLHLPLAT VTAVIYTSPL LLLLMSAFFL NERIGYRRTV AGIIGFTGIL LISQPTEFNL YIGLAFFGAM TSATNSLILK AYSTHEHPFS TLFWSNAFAM VFLIPATWYE GADFSLPVAQ VGLTLGLFYI GMTYLIIHAY RRADASQMAP VEYTGLIFAA LFGWWFLDEH LSIVVCIGIG LVIFSSILPS YSELKAKWKS RRS
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