Gene Shewana3_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2867 
Symbol 
ID4478742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3426533 
End bp3427942 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content50% 
IMG OID639727473 
ProductFmu (Sun) domain-containing protein 
Protein accessionYP_870500 
Protein GI117921308 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCG GCCGAGCCCC TTTTCAGGCT AACTTTATGG GCAATCCAAA CGGCTTATCA 
TCAGCAATCA TGGCATCAAC AGTGAATATC GAACCGCAAA CCCTCGCGCA AAAACGCGGT
TTAAGTTATG CCAATACCAT TAAGTTATTG TTCGATGAGA TTTTAAATAC CAAGCAACCC
GCCGACCGAG TGCTTGCGAA CTACTTTAGG GAACATAAAA AGCACGGCTC AAAGGATCGC
AAAGTGATCC GCGAATCCTT ATTTAGCCTG TTCCGTTGGT GGGGCTGGTT TAAAGCCACG
GGCGATCATC AACAGGCGCC CCAATTTTTT GCCATGCTCA GTGCGAGCGC CTTAATCGAA
GCCCATCCAT GGCAGGATAT CGCCCAAGCT TGGCATGAAC TCGCCCAATC GCCAGTTGAT
TATCAACAAC TTCAATCTCT TAGCGTTAAC AGATTAACGG ATAAGTTAGC ACTGGTACGG
CAGCAATTTC CCGAAGTGTC CTTCGAACTC ACAGATTTAT TACCCGAATG GTTTTGGCAG
GTATGCCCAA TTGCCGCAGA GCTACGTCCA AATCTCATCG AAGCCATGTC TAGCCGCCCA
CCGATTTGGG GACGTGCGCA GGGAATAGAC AGCCAAACGG CAGTTAAACA ACTGCAAGCG
CTAGAGATTG ATGCGAGCCT CAGCCCGTAT TTTGCAGATG CCTTTAACCT TGGCACTAAG
AGCATGAATC TCAATGAAAT ATCACTCTAT AAAGAGGGCA AAATTGAGAT CCAGGATTTA
GCCTCGCAAG TAATAGGTCA AATTTGTGCA CCAGATCCCT GGCAACACTG GTGGGATGCC
TGCAGTGGCG CAGGCGGAAA AACCCTGCAA TTGCGATCAC TGATGCAAAC GGCCGCGACT
AAGCAAAACC CATTAGTAGG CTCAATTGTG TCGTCGGATA TTCGCGCCCA CGCCTTAGAA
GAACTCAGCA AACGTGCCCA GAGGGCAAGG TTTGATGGCA TCAGCATTGC TCGCTGGCGC
AGTGATGCGC TGCCGGTCGA TGCCAACCAT TTTGATGGGG TATTAGTCGA CGCGCCCTGT
AGCTGCACGG GCACCTGGCG CCGTAATCCC GATATGCGCT GGCTCGACAG CCTCGATGCC
GTCACTGATA AAGCCACTCT CCAGCTGGAT ATTTTAAGCC GCAGCAGCAA GGCGGTAAAA
CAGGGCGGAA GCTTAGTCTA TGCCACTTGC TCATTGTCGC CTGTTGAAAA TGAGCAAGTG
GTTTCCGCCT TTTTACAACA ACATCCCGAA TTCAGCTTAG TGCCGATCCG CCACCCCTTT
ACCGGCGAAC AAACAAAAAT GTTGACCGTG TGGCCCTTCG AGGCCAACAC AGATGGAATG
TTTGTGGCGC GCATGCAGCG CAATTATTAG
 
Protein sequence
MSFGRAPFQA NFMGNPNGLS SAIMASTVNI EPQTLAQKRG LSYANTIKLL FDEILNTKQP 
ADRVLANYFR EHKKHGSKDR KVIRESLFSL FRWWGWFKAT GDHQQAPQFF AMLSASALIE
AHPWQDIAQA WHELAQSPVD YQQLQSLSVN RLTDKLALVR QQFPEVSFEL TDLLPEWFWQ
VCPIAAELRP NLIEAMSSRP PIWGRAQGID SQTAVKQLQA LEIDASLSPY FADAFNLGTK
SMNLNEISLY KEGKIEIQDL ASQVIGQICA PDPWQHWWDA CSGAGGKTLQ LRSLMQTAAT
KQNPLVGSIV SSDIRAHALE ELSKRAQRAR FDGISIARWR SDALPVDANH FDGVLVDAPC
SCTGTWRRNP DMRWLDSLDA VTDKATLQLD ILSRSSKAVK QGGSLVYATC SLSPVENEQV
VSAFLQQHPE FSLVPIRHPF TGEQTKMLTV WPFEANTDGM FVARMQRNY