Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2865 |
Symbol | |
ID | 4478740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3425036 |
End bp | 3425662 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727471 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_870498 |
Protein GI | 117921306 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0197504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTTT ATGAATTAGC CCCTACGCCA AGTGCAAGAC GCGTGAGTAT TTTCCTCGCC GAAAAAGGCA TCAACATCCC ACGTGTGAAT GTAGACATTC GCGGCGGCGA AAACCTCAGC CCTGAATTTA AAGCCAAAAG CTTAAACGGC CGTATTCCCC TGCTCGAACT CGATGATGGT AGCTATCTAT GTGAATCCGT TGCTATTTGC CGCTACTTAG AAGAAATCCA TCCAAGTGCA ACATCACTCT TTGGTAATAG TCCACTAGAG CGTGCCAGAG TCGAAATGTG GCAGCGCATT ATCGAGCTAC AAGGGTTGAT GGTCGGCTTT CAAGCCTTTA GAAACCTGAC GGGTATTTAC AAAGACAGGG AAAATTGTGT CGAAGCCTGG GGCGCAGAAT CACGCCAACG GATCATTGAC TTCCTGCCGA CCTTAGACCA ACAATTAGCC AAATCAAGCT ATGTGGCGAG CGATAACTTT ACGATTGCCG ATATTTCTGC ATACGTTTTT ATTAGCTTTA TTAAAAACTT AGATATTCTA GTGGATGACA CCTTGCCCCA CATTCAGGCA TGGTTTTCGA CAGTGGCCCA GCGCCCTGCG ATAGTGTCGC TTACCCCAAA AAACTGA
|
Protein sequence | MKLYELAPTP SARRVSIFLA EKGINIPRVN VDIRGGENLS PEFKAKSLNG RIPLLELDDG SYLCESVAIC RYLEEIHPSA TSLFGNSPLE RARVEMWQRI IELQGLMVGF QAFRNLTGIY KDRENCVEAW GAESRQRIID FLPTLDQQLA KSSYVASDNF TIADISAYVF ISFIKNLDIL VDDTLPHIQA WFSTVAQRPA IVSLTPKN
|
| |