Gene Shewana3_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2864 
Symbol 
ID4478739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand- 
Start bp3424269 
End bp3424880 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content48% 
IMG OID639727470 
ProductTetR family transcriptional regulator 
Protein accessionYP_870497 
Protein GI117921305 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.037684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA GTTGTAATTT TGATAGACAG GAAAAGCTTA TCCAGGCGAT GGAGCTGTTT 
TGGCAGAAGG GATTTGCCGA GACCTCGATT GCCGATCTGG TCGAACACTT AGGGATTAAT 
CGCTTCAGCT TGTATAACAG TTTTGGTGAT AAACAGAGCT TGTACCGCGA ATCCCTGCGC 
TTTTATCTCG ACCATTATTC CTTCGGCGCG AAGGAGCAAA TTCTGCACGC ACAGGCTGGG 
CTGAGTGAAA TCTTGACCTA TTTAGCGCGA TTTGTGGCCT TGCAGCGTGA GCAAGAGTAC 
GGCTGCTTTA TGCAGAATGC GGTGATGGAA AAATGCCTCG ACGATGACTG CGTGCAGCAG 
GAGTGCCAGC GTTTATTTGC CCAGTTGCTG ACTAATTTCA CCGATGTTTT ACGCTACAGT 
CAGCTGCAGG GCGAGTTGCC TCAATCGGTT CAACCTGAGT CGCTCGCGGC TTTTTTAGTG 
CTTCAATTAC AAGGGATTAG AGTGCTAGGC AAAGCGAAGG AGTACGTCCT GTTGGATAAT 
GCATTTAAGG TTTTAAGAGA ATACCTTACG AGTCTCGCAT TAACGCCACT TAAACCCGTC 
GATGTGAAAT AG
 
Protein sequence
MARSCNFDRQ EKLIQAMELF WQKGFAETSI ADLVEHLGIN RFSLYNSFGD KQSLYRESLR 
FYLDHYSFGA KEQILHAQAG LSEILTYLAR FVALQREQEY GCFMQNAVME KCLDDDCVQQ 
ECQRLFAQLL TNFTDVLRYS QLQGELPQSV QPESLAAFLV LQLQGIRVLG KAKEYVLLDN 
AFKVLREYLT SLALTPLKPV DVK