Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2860 |
Symbol | |
ID | 4478735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3419079 |
End bp | 3420275 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727466 |
Product | major facilitator transporter |
Protein accession | YP_870493 |
Protein GI | 117921301 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2807] Cyanate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.085124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCATA TTTTATCCAC TAGGGGCAAT CAACTGATGA TAGGCGTCAG TCTGTTACTT ATCGGGCTTA ATCTGCGCCC CATTCTTGCC TCTGTTGGCC CATTACTGCC GAGTATTCAA CAGGATATCT CCTTAAGTTT TGCCCTCGCC TCTATGCTCA CCCTACTACC AGTCCTCGCC ATGGGAATGG GTTGTTTCGT TGGTTTTAAG ATTGCTAAAG GCTTGGGGTT TGCAAACACT GTGACGGTAT CGCTGCTATT TCTGCTGATT GCAACTGCGA TGCGTTTTTG GGTCGAGACG GCGAATGCGC TGATCTGTTC TGCACTTTTA GCTGGCATGG GTATCGCTCT CATCCAAACC TTAATGCCTA CTCTGATTAA ACAAAACTTT GCCGACAAAA CGCCGTTGAT GATGGGCTTA TATGTCACCG CCATTATGGG CGGGGCGGCA CTGGCCGCCA GCAGCGCACC ATTTATAGCG GCCGATTTAG GCTGGCGAGC AGGCTTAGGC CATTGGACTT GGTTAGCCCT CATCGCCATC TTGCTATGGA TTGTCAGCCG AAAACATCTT GCCCTGCCGA GTCATACCGA CAAACAGGCG GAATACTCAT TTTGGCGCTA TCGCCGCAGT TGGTTATTGG CACTGTTTTT TGCTTTAGGA ACAAGTTGTT ATGTCTGCGT GCTCGCCTGG TTAGCACCTT ATGCCATCGA GTTAGGTTAT AGCCAAACCC AGGCAGGATT AGCCTTAGGC TTCCTCACCA GTATGGAAGT GATCGCAGGC TTAGTTTTTC CTTGGCTTGC CAGCAAATCG ACGGATAGAC GGGCGATTAT TGCCTTACTG TGTCTGTTGC AACTCATTGG TTTTATGGGA TTCGCCCTCG CTCCACAGGT GTCGATATTC CTCTGGGCCG CACTGGCGGG ACTCGGGATT GGTGGTATTT TCCCGCTGAG TTTGATTGTG ACTATGGATC ATCAACAGAA TCCGCTGTTA GCGGGTAAGT TAACCGCCTT TGTGCAGGGT ATTGGCTACA GTATTGCCGC TATCTCACCT TGGATAGCGG GACTTATTCG CGATAATTTC CAAAGCTTTA ATATGGCCTG GTTATTACTT GCGGCGCTGA GTGTCATCGC TTATCTGCTG TCGCGGCAAT TTAATCCGAG CGGCTATGCC CAGCACTATC GACAAGTGAT AGCCTAG
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Protein sequence | MSHILSTRGN QLMIGVSLLL IGLNLRPILA SVGPLLPSIQ QDISLSFALA SMLTLLPVLA MGMGCFVGFK IAKGLGFANT VTVSLLFLLI ATAMRFWVET ANALICSALL AGMGIALIQT LMPTLIKQNF ADKTPLMMGL YVTAIMGGAA LAASSAPFIA ADLGWRAGLG HWTWLALIAI LLWIVSRKHL ALPSHTDKQA EYSFWRYRRS WLLALFFALG TSCYVCVLAW LAPYAIELGY SQTQAGLALG FLTSMEVIAG LVFPWLASKS TDRRAIIALL CLLQLIGFMG FALAPQVSIF LWAALAGLGI GGIFPLSLIV TMDHQQNPLL AGKLTAFVQG IGYSIAAISP WIAGLIRDNF QSFNMAWLLL AALSVIAYLL SRQFNPSGYA QHYRQVIA
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