Gene Shewana3_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2860 
Symbol 
ID4478735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3419079 
End bp3420275 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content50% 
IMG OID639727466 
Productmajor facilitator transporter 
Protein accessionYP_870493 
Protein GI117921301 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.085124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATA TTTTATCCAC TAGGGGCAAT CAACTGATGA TAGGCGTCAG TCTGTTACTT 
ATCGGGCTTA ATCTGCGCCC CATTCTTGCC TCTGTTGGCC CATTACTGCC GAGTATTCAA
CAGGATATCT CCTTAAGTTT TGCCCTCGCC TCTATGCTCA CCCTACTACC AGTCCTCGCC
ATGGGAATGG GTTGTTTCGT TGGTTTTAAG ATTGCTAAAG GCTTGGGGTT TGCAAACACT
GTGACGGTAT CGCTGCTATT TCTGCTGATT GCAACTGCGA TGCGTTTTTG GGTCGAGACG
GCGAATGCGC TGATCTGTTC TGCACTTTTA GCTGGCATGG GTATCGCTCT CATCCAAACC
TTAATGCCTA CTCTGATTAA ACAAAACTTT GCCGACAAAA CGCCGTTGAT GATGGGCTTA
TATGTCACCG CCATTATGGG CGGGGCGGCA CTGGCCGCCA GCAGCGCACC ATTTATAGCG
GCCGATTTAG GCTGGCGAGC AGGCTTAGGC CATTGGACTT GGTTAGCCCT CATCGCCATC
TTGCTATGGA TTGTCAGCCG AAAACATCTT GCCCTGCCGA GTCATACCGA CAAACAGGCG
GAATACTCAT TTTGGCGCTA TCGCCGCAGT TGGTTATTGG CACTGTTTTT TGCTTTAGGA
ACAAGTTGTT ATGTCTGCGT GCTCGCCTGG TTAGCACCTT ATGCCATCGA GTTAGGTTAT
AGCCAAACCC AGGCAGGATT AGCCTTAGGC TTCCTCACCA GTATGGAAGT GATCGCAGGC
TTAGTTTTTC CTTGGCTTGC CAGCAAATCG ACGGATAGAC GGGCGATTAT TGCCTTACTG
TGTCTGTTGC AACTCATTGG TTTTATGGGA TTCGCCCTCG CTCCACAGGT GTCGATATTC
CTCTGGGCCG CACTGGCGGG ACTCGGGATT GGTGGTATTT TCCCGCTGAG TTTGATTGTG
ACTATGGATC ATCAACAGAA TCCGCTGTTA GCGGGTAAGT TAACCGCCTT TGTGCAGGGT
ATTGGCTACA GTATTGCCGC TATCTCACCT TGGATAGCGG GACTTATTCG CGATAATTTC
CAAAGCTTTA ATATGGCCTG GTTATTACTT GCGGCGCTGA GTGTCATCGC TTATCTGCTG
TCGCGGCAAT TTAATCCGAG CGGCTATGCC CAGCACTATC GACAAGTGAT AGCCTAG
 
Protein sequence
MSHILSTRGN QLMIGVSLLL IGLNLRPILA SVGPLLPSIQ QDISLSFALA SMLTLLPVLA 
MGMGCFVGFK IAKGLGFANT VTVSLLFLLI ATAMRFWVET ANALICSALL AGMGIALIQT
LMPTLIKQNF ADKTPLMMGL YVTAIMGGAA LAASSAPFIA ADLGWRAGLG HWTWLALIAI
LLWIVSRKHL ALPSHTDKQA EYSFWRYRRS WLLALFFALG TSCYVCVLAW LAPYAIELGY
SQTQAGLALG FLTSMEVIAG LVFPWLASKS TDRRAIIALL CLLQLIGFMG FALAPQVSIF
LWAALAGLGI GGIFPLSLIV TMDHQQNPLL AGKLTAFVQG IGYSIAAISP WIAGLIRDNF
QSFNMAWLLL AALSVIAYLL SRQFNPSGYA QHYRQVIA