Gene Shewana3_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2859 
Symbol 
ID4478734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3418376 
End bp3418969 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content51% 
IMG OID639727465 
ProductMarR family transcriptional regulator 
Protein accessionYP_870492 
Protein GI117921300 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.195549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTG CGGCAAAATG GTTAGCATGT AAAGAATCTT TATGTAGAGA TAAAACCATG 
GCAGAAAATC AATCAGCACT CGATACTCAG CAGGCACTCG TAACGTCTGA AGACGGATTG
GATATCATCC TTGGGCAGTG GCAGGCTCAA GGGGTGACAG AGGATTTGGT TCCGATGGCG
GTGTTAGGAC GCATCGCGCG CCTGACCAAA TATATGGAAA ACGCCATCGC CCTGTGTCAC
GGCGAATTTG GCCTAGGTCA GGGGGAATTT GATGTGCTCG CGACCCTCAG ACGTTCAGGC
GAGCCTTATA TGCTATCGCC TTCGCAGCTG TATCAGAGCA TGATGTTAAG CTCTGGCGCC
ATGACCAGTC GCTTAGACCG ACTTGAAAAT AAAGGGCTGA TTGCCCGTGA GCACAGTAAG
GAAGACCGCC GCGCCGTGCA TGTGTCGCTC ACCGCAGAAG GCAAGGCGTT GATTGACGCG
GCGTTGCCCA AACATATTCA ATGTCAGAGC GCGTTATTGG CAGGGGTGCC TAGCGCCGAG
CGCGAAATAT TACAGCAGAT TTTAAAGACT TGGCTTGCTC ACTTTGAACG GTAA
 
Protein sequence
MNSAAKWLAC KESLCRDKTM AENQSALDTQ QALVTSEDGL DIILGQWQAQ GVTEDLVPMA 
VLGRIARLTK YMENAIALCH GEFGLGQGEF DVLATLRRSG EPYMLSPSQL YQSMMLSSGA
MTSRLDRLEN KGLIAREHSK EDRRAVHVSL TAEGKALIDA ALPKHIQCQS ALLAGVPSAE
REILQQILKT WLAHFER