| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2857 |
|---|
| Symbol | |
|---|
| ID | 4478732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3416612 |
|---|
| End bp | 3417238 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639727463 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_870490 |
|---|
| Protein GI | 117921298 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.410954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTG TTAACGTCGG TGATAAACAG ATTTGCCCGA GTAAGATTCT GTGTATTGGG
CGAAATTATG TCGACCATAT CCACGAGCTG GGTAATGACA TTCCCGAAGA CATGGTGGTG
TTTTTCAAGC CAAACTCGGC TATTAGCACT GTGCTGCATG CTGAGCATTT AGGTGAGACG
CTGCACTATG AAACTGAGCT GTGTTTTATC TATCAGCAGG GACGTTTTAG CCATGTTGGG
GTTGGGCTGG ATCTCACGAA GCGAGAGCTG CAAAGTAAAC TGAAAACCAA GGGATTACCC
TGGGAAAAGG CCAAGGCCTT CGATGGCGCG GCGCTATTTA GTCCCTTTGT CGCTATTGAT
GATGCCAGCG CGGCATTTGA ATTCAGCTTA ACGATAGACG GGGCGTTAAC CCAAGCGGGT
CATATTGAGT TAATGATCTA TAATCCGCAG ACGATTCTAG AAGAATTACA ACGCTTTACT
ACCTTAGAAG ACGGCGATAT TGTGATGACG GGCACCCCAA AAGGCGTCGG CATCATTCCA
CCGAATCGCG TATTTAAGGT GGCCTTAGGC CTTAAGGATG CGCCACACCA AACGCCCTTG
GTCGAATGTG AATGGCAAAG CCGGTAA
|
|---|
| Protein sequence | MKTVNVGDKQ ICPSKILCIG RNYVDHIHEL GNDIPEDMVV FFKPNSAIST VLHAEHLGET
LHYETELCFI YQQGRFSHVG VGLDLTKREL QSKLKTKGLP WEKAKAFDGA ALFSPFVAID
DASAAFEFSL TIDGALTQAG HIELMIYNPQ TILEELQRFT TLEDGDIVMT GTPKGVGIIP
PNRVFKVALG LKDAPHQTPL VECEWQSR
|
|---|
| |