Gene Shewana3_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2851 
Symbol 
ID4478726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3412814 
End bp3413362 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content47% 
IMG OID639727457 
Producttransport-associated 
Protein accessionYP_870484 
Protein GI117921292 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.884447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CGACAACTTT AGCTTTAACC ACCTTACTTG TCGGTTCTAT CAGTTTAAAT 
GTGGCCGCCG CACAGGATTG GAAAGACGAT GCCAAAGATG CTTGGCTAGA TGGCAAGGCC
GAAACGACTT TGTTGCTCAA TACTAACCTC AACTCCTTTG ACATTATGAC CGACGTGAAA
AACGGCCATG TCACCTTAAC CGGTCAAGTG GAGAGCAGTG TCGATAAGGC GCTCGCCGCT
GAGCTCATCA AAAGCTTAGA TGGCGTAAAA GGGGTCGATA ACAAGTTAAC CGTGATGAAA
GAAGACGAAG GCACCAATGA GGTGGTGAAG ACCTTAACCG ACTCTAAGGT CGCAACGGTC
GTAAAAACCC GTCTGTTGTT CTCGACCGAC GTATCGGGCA CCCAAATTAA TGTCGATGTT
GCCGATGGCG TAGTGACCTT ACAGGGTGAA GTGGCTAGCG ACGCCGAGCG TCAATTAGCC
CTGACCATTG CTAAAAATAC CGATGATGTG AAAAAGGTCG TCGATAAAAT CAAAGTCAAA
ACCTCATAA
 
Protein sequence
MKNTTTLALT TLLVGSISLN VAAAQDWKDD AKDAWLDGKA ETTLLLNTNL NSFDIMTDVK 
NGHVTLTGQV ESSVDKALAA ELIKSLDGVK GVDNKLTVMK EDEGTNEVVK TLTDSKVATV
VKTRLLFSTD VSGTQINVDV ADGVVTLQGE VASDAERQLA LTIAKNTDDV KKVVDKIKVK
TS