Gene Shewana3_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2825 
Symbol 
ID4479813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3374146 
End bp3374481 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content48% 
IMG OID639727431 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_870458 
Protein GI117921266 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTA TATCGATGCT TTACAGCCAA ACTCAAACCA AACTAGCCCA AATTGCCCAC 
GAGCTACAAA GTGCAGGGCT TTGGTCTACT CGTGCGCCCA GTGATGAAGC TATGGCCAGT
ACGGCGCCTT TTGCCTGCGA TCTGATGTCG TTAGCGCAAT GGTTGCAGTT TATCTTTATT
CCGCGCATGC AAGCCCTTAT CGATGCGGGG CAACCTTTGC CAAGTAAAAT TGCGATAGCC
CCGATGGCGG AACATGTGTG GTCCGAACAA GCGGCGTTAA CACCTTTAAT CGGTGTCTTA
AATGAATTGG ATATGTTGTT AAATGAACCT AGATGA
 
Protein sequence
MDLISMLYSQ TQTKLAQIAH ELQSAGLWST RAPSDEAMAS TAPFACDLMS LAQWLQFIFI 
PRMQALIDAG QPLPSKIAIA PMAEHVWSEQ AALTPLIGVL NELDMLLNEP R