Gene Shewana3_2810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2810 
Symbol 
ID4479797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3357640 
End bp3358497 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID639727416 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_870443 
Protein GI117921251 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000490464 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAAAAC AACGTATAAT AACAGCAATT TGGTTAATTC CATTAGTTTT GGGAGCGATC 
TTTTTACTCC CCGTAGAGTA CTTTGCTTGG GCCTTAGTGG CCGTGTTTCT GATCGCCGCT
AAGGAGTGGG GCAGGATCAT CGATAGTCAA TGTGATGTGA CTCAATGGAG TTTTACTTGC
ACCGTCGGTA TTTTACTAAT CGCGTTGAAT TTAATTGTTC CCGCCGACAC CATTTGGCTT
AGGGGACAAA TTCATCCTAT CTATCTTGCC GTGATGGCCA TCGGTGCACT GTGGTGGATA
GCGTCGCTGC TGTTAGTGGT GACTTACCCT AAGAGCGCCA AACTCTGGCA AAAGAACCCG
ATGCTAAAGT CCATGTTTGG ACAACTCACT TTAGTGCCTT GTTTTGTGGC GCTGATTGCA
CTCAAATCCA TTAGCTCGCA AATATCGCCA TACTATGGCG CGTCATTGGT ATTACTGGTG
ATGCTGATTG TTTGGGCAGC GGATTCGGGC GCGTATTTTG TCGGTAAAGC GGTTGGCAAG
ACCAAGCTGA TGCCTGCGGT GAGCCCTGCT AAAACCTTAG AAGGGTTACT GGGCGGCCTG
ATGACGACAC TGATTGTGGT CGCGGGTGTT ATGTATATTT CGCCTGAGCA GGAATTAGGT
TTAGTGGTCG CGGTCACTAT TTTCGTGGCG CTGATTTCGG CGCTTGGCGA TTTATCCGAG
AGTATGTTTA AGCGTGCCGC CTGTATCAAA GACTCGGGCA CGATTCTGCC TGGGCATGGT
GGCGTGCTCG ATCGCATCGA CAGCCTCACT GCGGCCCTGC CGGTGTTTAC CTTAATCTAC
ATTGCATTTT GGATGTAA
 
Protein sequence
MLKQRIITAI WLIPLVLGAI FLLPVEYFAW ALVAVFLIAA KEWGRIIDSQ CDVTQWSFTC 
TVGILLIALN LIVPADTIWL RGQIHPIYLA VMAIGALWWI ASLLLVVTYP KSAKLWQKNP
MLKSMFGQLT LVPCFVALIA LKSISSQISP YYGASLVLLV MLIVWAADSG AYFVGKAVGK
TKLMPAVSPA KTLEGLLGGL MTTLIVVAGV MYISPEQELG LVVAVTIFVA LISALGDLSE
SMFKRAACIK DSGTILPGHG GVLDRIDSLT AALPVFTLIY IAFWM