Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2810 |
Symbol | |
ID | 4479797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3357640 |
End bp | 3358497 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727416 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_870443 |
Protein GI | 117921251 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000490464 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTAAAAC AACGTATAAT AACAGCAATT TGGTTAATTC CATTAGTTTT GGGAGCGATC TTTTTACTCC CCGTAGAGTA CTTTGCTTGG GCCTTAGTGG CCGTGTTTCT GATCGCCGCT AAGGAGTGGG GCAGGATCAT CGATAGTCAA TGTGATGTGA CTCAATGGAG TTTTACTTGC ACCGTCGGTA TTTTACTAAT CGCGTTGAAT TTAATTGTTC CCGCCGACAC CATTTGGCTT AGGGGACAAA TTCATCCTAT CTATCTTGCC GTGATGGCCA TCGGTGCACT GTGGTGGATA GCGTCGCTGC TGTTAGTGGT GACTTACCCT AAGAGCGCCA AACTCTGGCA AAAGAACCCG ATGCTAAAGT CCATGTTTGG ACAACTCACT TTAGTGCCTT GTTTTGTGGC GCTGATTGCA CTCAAATCCA TTAGCTCGCA AATATCGCCA TACTATGGCG CGTCATTGGT ATTACTGGTG ATGCTGATTG TTTGGGCAGC GGATTCGGGC GCGTATTTTG TCGGTAAAGC GGTTGGCAAG ACCAAGCTGA TGCCTGCGGT GAGCCCTGCT AAAACCTTAG AAGGGTTACT GGGCGGCCTG ATGACGACAC TGATTGTGGT CGCGGGTGTT ATGTATATTT CGCCTGAGCA GGAATTAGGT TTAGTGGTCG CGGTCACTAT TTTCGTGGCG CTGATTTCGG CGCTTGGCGA TTTATCCGAG AGTATGTTTA AGCGTGCCGC CTGTATCAAA GACTCGGGCA CGATTCTGCC TGGGCATGGT GGCGTGCTCG ATCGCATCGA CAGCCTCACT GCGGCCCTGC CGGTGTTTAC CTTAATCTAC ATTGCATTTT GGATGTAA
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Protein sequence | MLKQRIITAI WLIPLVLGAI FLLPVEYFAW ALVAVFLIAA KEWGRIIDSQ CDVTQWSFTC TVGILLIALN LIVPADTIWL RGQIHPIYLA VMAIGALWWI ASLLLVVTYP KSAKLWQKNP MLKSMFGQLT LVPCFVALIA LKSISSQISP YYGASLVLLV MLIVWAADSG AYFVGKAVGK TKLMPAVSPA KTLEGLLGGL MTTLIVVAGV MYISPEQELG LVVAVTIFVA LISALGDLSE SMFKRAACIK DSGTILPGHG GVLDRIDSLT AALPVFTLIY IAFWM
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