| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2807 |
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| Symbol | |
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| ID | 4479794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3352511 |
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| End bp | 3354991 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639727413 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_870440 |
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| Protein GI | 117921248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000285002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTGA ATAAACTTTT TGCCTCGATG TTATTCGTCG GTGCGTCGTT TTCAGGGACT
GTGTTGGCGG ATACGTTCCA ACCCTTTGAA GTGACCGACA TCCAAGTTGA AGGTTTGCAG
CGAGTCGCAC TGGGTGCTGC CTTGTTAAGC TTACCTGTGA AAGTGGGTGA CACTGTTGAC
CAGTTAAAAA TTCAACAAGC CATTAAAAGC CTGTATGCAT CGACTAACTT TGAGAACATC
TCAGTCAGTC ATGATGGCGG CGTGTTGATT GTTAAAGTCA CTGAGCGACC AACGATCAGC
GCCGTGACCT TTGAAGGCAA CAAAGACATT AAAGATGAGC AGTTACAGGA AAGTCTGGAC
GGCTCAGGCG TGAAAGTCGG CGAGTCCTTA GACCGTACTA TGCTGACGGG CATCGAGAAG
GGGTTACAAG ACTTCTACTA CGGTGTGGGT AAATACGGTG CGAAAGTCGA AGCGCAGGTG
ATTAACTTGC CCCGTAACCG CGTCGAACTC AAATTCAAGT TCACCGAAGG TTTAGCGGCT
GAAATTCGCC AAATTAACGT GGTTGGCAAC AAAGAGTTCA CCGATGCTGA GCTTATCGGC
ATGTTAGAAC TCAAAGACTA CGTGGCCTGG TGGGATCTGT TTGGTGAGCG TCGCTACCAG
AAGCAAAAGC TGCAAGCTGA CCTTGAAACC ATTAAAACCT ATTACCACAA CAAGGGTTAT
ATTCGCTTTG AAGTCACCTC GACTCAAGTG GCGATGACGC CTGACCGTAA AGGTTTGTAT
ATCACCATCA ACGTCAACGA AGGTGAGAAG TACAAGGTTA AAGACGTTAA CCTCACCGGC
GACTTAATGG GCCGCGAAGA GTTAATGAAA TCGATTCTGC CAATTAAGGC TGGCGATATG
TACAACGGCG GTGATGTGAC CTTCACCGAA GAGATGTACA GCAAATACTT AGGTCGTTTC
GGTTACGCGT ATCCTGAAGT GAAAACCTAC CCTGAAATTG ATGATAAAAC TAAGGAAGTG
ACCTTAAACA TCAATATCAA ACCGGGTAAA CGTGTGTATG TCCGTTCGGT TAACTTCACC
GGTAACACAG TGACTAAAGA CGAAGTGATG CGCCGCGAGC TGCGTCAGAT GGAAGGTGCT
TGGTTAAACT CGGCGCAGGT TGAGCAATCA AAAGCCCGTC TAAACCGCTT AGGCTTCTTC
GAAACCGTTG ATACCGAAAC CATTCAAGTG CCGGGTACCG ACGATTTAGT CGATGTGGCC
GTGAAGGTTA AAGAGCAGCC ATCGGGCTCA TTTAACGCCG GTGTGGGTTA TGGTACTGAA
TCAGGCTTAA GTCTGCAGTT TGGTGTGCAG CAAAATAACT TCCTCGGTAC GGGTAACCAA
GCGGGCGTGA GTTTAAGCAC CAACAAGTAT TCTAAAAACG TTAACTTGTC TTACACCGAT
CCTTATTGGA CCAAAGATGG TGTGAGCTTA GGTGGCAGCG TTTACTGGAA CGAGTTTGAT
GCGAATGAGG CTAACCTTGA GCGTTATAAG AACAGCTCCT ACGGTGTGGC ATTAAACTCT
GGCTTCCCAA TTAACGAATA CAACCGTATC AACGGTGGTA TTGGCTATCG TCATAACACG
ATTTCAGAAA TCTCTGCCTA CGAACAGGCG CTGCGTTTCT ACAATATCTA CCGTGACGAT
GACCCGAATG CCGATTTAAG CTTCGACAAT TTCGAGCTCA GCTTAGGCTG GTACCGCAGC
ACCTTAAACC GTGGCACCTT CCCAACAGAC GGTTCGTCAC AGCGTTTAAG CGGTAAGATG
ACTGTACCTG GCTCGGATCT GCAGTACTTT AAGACTGACT TCGATACTAA CTATTATTTC
CCTATAACTC GTAGCCACAG TTTTGTGCTG TTAGCGCGTG GTCGTTTAGG TTATGGCAAC
GGTTACGGTC AATTTAATGA TAATGACCAA ATCCTGCCAT TCTGGGAAAA CTATTACTCG
GGCGGTAGTA CCTCACTACG TGGCTTTAAG TCTAACTCGG TCGGTCCTCG TTCATTCTAT
CTCTTCCGTG GTAGTGAGCC ATGTGCGCCG GATCCATCGG GTGACGGTTG TAGCTTACCG
GGCGATCCTA ACAGTATTCA GGTCAGTTCT GGTCGTTCAA TCGGTGGTAA CGCGATTGCA
ACCGCCAGTA TGGAGCTGAT TGTGCCAACG CCATTCTTGG ATGAGGCCTA CACTAACTCT
GTTCGTACCA GCTTCTTCGT CGATGCGGGT AACGTATGGG ATACTGAGTT TGATTTCGCT
AAGTATCAAA CGTTGCCAGC GGAAGAGTTT GATAAGTTGC AGGACTACAG TGACCCAGGT
CGTATCAGAG CCTCTTGGGG GGTAAGCTTA CAGTGGCTGT CTCCTATGGG ACCCATGGTA
TTCAGCTTGG CATGGCCGAT TAAAGAATAC GAAGGCGATC AAACAGAGAT CTTCTCGTTC
AATATTGGCA AAACTTTTTA A
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| Protein sequence | MRLNKLFASM LFVGASFSGT VLADTFQPFE VTDIQVEGLQ RVALGAALLS LPVKVGDTVD
QLKIQQAIKS LYASTNFENI SVSHDGGVLI VKVTERPTIS AVTFEGNKDI KDEQLQESLD
GSGVKVGESL DRTMLTGIEK GLQDFYYGVG KYGAKVEAQV INLPRNRVEL KFKFTEGLAA
EIRQINVVGN KEFTDAELIG MLELKDYVAW WDLFGERRYQ KQKLQADLET IKTYYHNKGY
IRFEVTSTQV AMTPDRKGLY ITINVNEGEK YKVKDVNLTG DLMGREELMK SILPIKAGDM
YNGGDVTFTE EMYSKYLGRF GYAYPEVKTY PEIDDKTKEV TLNINIKPGK RVYVRSVNFT
GNTVTKDEVM RRELRQMEGA WLNSAQVEQS KARLNRLGFF ETVDTETIQV PGTDDLVDVA
VKVKEQPSGS FNAGVGYGTE SGLSLQFGVQ QNNFLGTGNQ AGVSLSTNKY SKNVNLSYTD
PYWTKDGVSL GGSVYWNEFD ANEANLERYK NSSYGVALNS GFPINEYNRI NGGIGYRHNT
ISEISAYEQA LRFYNIYRDD DPNADLSFDN FELSLGWYRS TLNRGTFPTD GSSQRLSGKM
TVPGSDLQYF KTDFDTNYYF PITRSHSFVL LARGRLGYGN GYGQFNDNDQ ILPFWENYYS
GGSTSLRGFK SNSVGPRSFY LFRGSEPCAP DPSGDGCSLP GDPNSIQVSS GRSIGGNAIA
TASMELIVPT PFLDEAYTNS VRTSFFVDAG NVWDTEFDFA KYQTLPAEEF DKLQDYSDPG
RIRASWGVSL QWLSPMGPMV FSLAWPIKEY EGDQTEIFSF NIGKTF
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