Gene Shewana3_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2794 
Symbol 
ID4479781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3333270 
End bp3334028 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID639727400 
Productputative hydrolase 
Protein accessionYP_870427 
Protein GI117921235 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.165673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACC CAGTCGATAC CCATACCCAT ACCTTGGCAT CTACCCATGC CTATAGCACT 
ATCCACGATT ATTTGGCGGT GGCGAAGCAA AAGGGGATCC GTCTGTTTGC CACCACTGAC
CATGGCCCGG CGATGGCGGA TGCACCGCAT TTTTGGCATT TTGTGAATTT ACGCGTGCTC
CCGCGTATGG TTGATGGCGT GGGGATTTTA CGCGGCATCG AGGCCAATAT TAAAAACCGC
GAAGGTGAAA TCGATTACTT TGGCGATTAT CTGTCGCAGC TCGATATTGT GTTGGCAGGA
TTCCATGAAC CAGTATTTCC GCCTTCGGAT AAGGCCACCC ATACCGAGGC GATGATTAAC
GCCATTAAAA GCGGCAAGGT CGATATTATT ACCCATCCGG GTAATCCTGC TTATCCCATT
GATATTGAGG CTGTAGCCGC AGCTGCCGCC GAATATGGAG TGGCGCTTGA AATCAATAAC
TCCTCCTTTG AAGTCTCTCG CAAGGGCAGC GAAGCTAACT GCACCGCGAT TGCTAAAGCG
GCAAAAGAAT TGGGGGCCAC CTTAGTGATG GGCTCAGATT CCCATGTGGC TTTTAGTCTC
GGCGGGTTTG ACCGTGCCTT AAGTATTATT GAAGCAGTTG ATTATCCAAA GGATAAGCTG
CTTAATCGCT CACCGATGGC ACTGCTTAAC TTCTTAACTC AGCGGGGGCA TCAAAGCGTT
GCTGATTTAA TGCCGTTGTT TAGCGACGAT ATCGCTTGA
 
Protein sequence
MQYPVDTHTH TLASTHAYST IHDYLAVAKQ KGIRLFATTD HGPAMADAPH FWHFVNLRVL 
PRMVDGVGIL RGIEANIKNR EGEIDYFGDY LSQLDIVLAG FHEPVFPPSD KATHTEAMIN
AIKSGKVDII THPGNPAYPI DIEAVAAAAA EYGVALEINN SSFEVSRKGS EANCTAIAKA
AKELGATLVM GSDSHVAFSL GGFDRALSII EAVDYPKDKL LNRSPMALLN FLTQRGHQSV
ADLMPLFSDD IA