Gene Shewana3_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2790 
Symbol 
ID4479777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3330001 
End bp3330921 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content53% 
IMG OID639727396 
Productfructokinase 
Protein accessionYP_870423 
Protein GI117921231 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00939579 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATACGCA TGGGCATCGA TTTAGGTGGC ACAAAAATAG AACTCGTCGC CTTAAGTGAG 
GAAGGTAATG AACTGTTTCG TAAGCGTATC AATACCCCTA GGGATTATCA GGGCACACTG
AATGCCATCG TCGATTTAGT GAATGAGGCC GAAGCGACCT TAGGTGAAAA GGGCACGGTT
GGCGTGGGGA TCCCGGGAGT CATTTCTCCC TATTCAGGAT TAGTCAAAAA TGCCAACTCG
ACTTGGATCA ACGGTCATCC CCTCGATGTG AATTTAGGGG AGCTGCTCGG CCGTGAAGTG
CGAGTCGCTA ACGATGCCAA CTGTTTTGCG GTATCCGAGG CCGTCGATGG TGCTGCTGCG
GGTAAATCCG TGGTGTTCGG GGTGATCATT GGCACGGGCT GCGGCGCGGG TGTGGCCATT
AACGGTAAAG TACACGCTGG CGGCAATGGT ATTGGCGGTG AGTGGGGCCA TAATCCGCTG
CCTTGGATGA CCAAGGAGGA GTTTAATACT ACCCGTTGTT TCTGCGGGAA TCCCGATTGT
ATCGAAACCT TTATTTCTGG CACGGGCTTT GTTCGCGATT ACAACGAGGC CCTCAGCCGT
GCGGTGAATG TCCAAGCTGC ACCCGCTAAA TCTGGCACTG AGATCATGGC CTTAGTCGAT
GCGGGTGATG AAATGGCGAT CGCGGCCTTT GATCGTTACA TGGACAGACT GGCGCGCTCA
CTCGCCCATG TGATTAATAT GCTCGACCCC GATGCGATTG TCCTCGGCGG TGGCATGTCT
AATATTGAGG CGACCTATCC AAGATTACCT GCATTATTAA CTCGTTATGT TGTGGGGCGT
GAATGCCGTA CTCCAGTGGT GCAGAATCTC TATGGCTGCT CTTCGGGTGT GCGCGGCGCC
GCTTGGTTAT GGGAAAAATA A
 
Protein sequence
MIRMGIDLGG TKIELVALSE EGNELFRKRI NTPRDYQGTL NAIVDLVNEA EATLGEKGTV 
GVGIPGVISP YSGLVKNANS TWINGHPLDV NLGELLGREV RVANDANCFA VSEAVDGAAA
GKSVVFGVII GTGCGAGVAI NGKVHAGGNG IGGEWGHNPL PWMTKEEFNT TRCFCGNPDC
IETFISGTGF VRDYNEALSR AVNVQAAPAK SGTEIMALVD AGDEMAIAAF DRYMDRLARS
LAHVINMLDP DAIVLGGGMS NIEATYPRLP ALLTRYVVGR ECRTPVVQNL YGCSSGVRGA
AWLWEK