Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2790 |
Symbol | |
ID | 4479777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3330001 |
End bp | 3330921 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639727396 |
Product | fructokinase |
Protein accession | YP_870423 |
Protein GI | 117921231 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00939579 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATACGCA TGGGCATCGA TTTAGGTGGC ACAAAAATAG AACTCGTCGC CTTAAGTGAG GAAGGTAATG AACTGTTTCG TAAGCGTATC AATACCCCTA GGGATTATCA GGGCACACTG AATGCCATCG TCGATTTAGT GAATGAGGCC GAAGCGACCT TAGGTGAAAA GGGCACGGTT GGCGTGGGGA TCCCGGGAGT CATTTCTCCC TATTCAGGAT TAGTCAAAAA TGCCAACTCG ACTTGGATCA ACGGTCATCC CCTCGATGTG AATTTAGGGG AGCTGCTCGG CCGTGAAGTG CGAGTCGCTA ACGATGCCAA CTGTTTTGCG GTATCCGAGG CCGTCGATGG TGCTGCTGCG GGTAAATCCG TGGTGTTCGG GGTGATCATT GGCACGGGCT GCGGCGCGGG TGTGGCCATT AACGGTAAAG TACACGCTGG CGGCAATGGT ATTGGCGGTG AGTGGGGCCA TAATCCGCTG CCTTGGATGA CCAAGGAGGA GTTTAATACT ACCCGTTGTT TCTGCGGGAA TCCCGATTGT ATCGAAACCT TTATTTCTGG CACGGGCTTT GTTCGCGATT ACAACGAGGC CCTCAGCCGT GCGGTGAATG TCCAAGCTGC ACCCGCTAAA TCTGGCACTG AGATCATGGC CTTAGTCGAT GCGGGTGATG AAATGGCGAT CGCGGCCTTT GATCGTTACA TGGACAGACT GGCGCGCTCA CTCGCCCATG TGATTAATAT GCTCGACCCC GATGCGATTG TCCTCGGCGG TGGCATGTCT AATATTGAGG CGACCTATCC AAGATTACCT GCATTATTAA CTCGTTATGT TGTGGGGCGT GAATGCCGTA CTCCAGTGGT GCAGAATCTC TATGGCTGCT CTTCGGGTGT GCGCGGCGCC GCTTGGTTAT GGGAAAAATA A
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Protein sequence | MIRMGIDLGG TKIELVALSE EGNELFRKRI NTPRDYQGTL NAIVDLVNEA EATLGEKGTV GVGIPGVISP YSGLVKNANS TWINGHPLDV NLGELLGREV RVANDANCFA VSEAVDGAAA GKSVVFGVII GTGCGAGVAI NGKVHAGGNG IGGEWGHNPL PWMTKEEFNT TRCFCGNPDC IETFISGTGF VRDYNEALSR AVNVQAAPAK SGTEIMALVD AGDEMAIAAF DRYMDRLARS LAHVINMLDP DAIVLGGGMS NIEATYPRLP ALLTRYVVGR ECRTPVVQNL YGCSSGVRGA AWLWEK
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