Gene Shewana3_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2788 
Symbol 
ID4479775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand- 
Start bp3328480 
End bp3329154 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content48% 
IMG OID639727394 
Producthypothetical protein 
Protein accessionYP_870421 
Protein GI117921229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.742818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0156454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAG AGTCCGATGT TGTCTCGATT CGCCCGCTCT CAAAACGTAA TGGTGTAACC 
TTAACGATTG TAGGCGCCAG TGCTTTTGTC TTAGGCTGTG GCCTATTTGT ACTATTTCCC 
GAGCTATTTG CCGTGGGCTT AGTGTTTTTC AGCTTAGGTG CGATTGCCTT GATATTGGGC 
TTAGCCAAAG TGTACGAGCC TGAGACCACC TTAAGCATGG ATGAGCAGGG GCTGACCTAT 
TTTCATCGCC GCGGCAAAGT GGCGGTAAGC TGGAGCAATA TTCAACGAGT AGATATTCCA 
CGAGTTACTC AGGGTGTTGA TACGATTGAG CTTTCCTATA TCGGCATTAA GCTCAAACAG 
TTGAATCCTA TCCTCGATAA CATTTCATTG CGTCTTGCGG CGGGTTTATT GACTGAGCAG 
CGGCCATTAC TGGTGACTGC AGCCTCACAG CAGGAAGATT TGGCAACCTT AGAAACCTAC 
CTTGGCGCCG AGTTTAGCCC TTTAGTGGTC GATGGCGATC GCTACCGTGG GGTATTAGCG 
ATGTTTGGTC ATCGCTGCGT TATGCTCAAT ACTCACCTTG GTTATCATCT TTATATTCCC 
CACGACAGTT TAGACCGTGA CCCGAGAGAA TTTATTAAGC TGTTAAGGCA ACGTATCGCG 
CAAAGTGCTA CTTAA
 
Protein sequence
MTQESDVVSI RPLSKRNGVT LTIVGASAFV LGCGLFVLFP ELFAVGLVFF SLGAIALILG 
LAKVYEPETT LSMDEQGLTY FHRRGKVAVS WSNIQRVDIP RVTQGVDTIE LSYIGIKLKQ 
LNPILDNISL RLAAGLLTEQ RPLLVTAASQ QEDLATLETY LGAEFSPLVV DGDRYRGVLA 
MFGHRCVMLN THLGYHLYIP HDSLDRDPRE FIKLLRQRIA QSAT