Gene Shewana3_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2785 
Symbol 
ID4479772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3324079 
End bp3324522 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content49% 
IMG OID639727391 
Producthypothetical protein 
Protein accessionYP_870418 
Protein GI117921226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.668707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00289407 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGGCA AAAAGTTCAC CTTTACCCGA AGCGCCTCCC CTGCACTAAG CTTTATCGCC 
GAGGGGACTA AACTTACGGG CAATATGGAA TTTACCGGTG ATGTGTTGAT TGGCGGTGAA
GTGCAAGGAC AAATCCTGTC ACAGGCCAAT GTGATTGTAG AGCGGACAGG TAAGCTTCAT
AGCGAGGTTA AATGCCGTGA ACTGATTATT GATGGCTACT TTAAAGGTCG ATTGATTTGC
GAGCGCTTGG TCATCCAAGG CCATGGTATT GTCGATGGCG ATGTGGCGTG TACCTCGATG
CAGATCAGCG AAGGCGGCCA GTTTATAGGG TTAAGGATTA AGGAAGATCA CCAAACCATC
CATGCCCATC CGCTCCCCTC ACCCGGCTCT GCAAATGTAT TACTGTCAAC CTCAGCATCT
CTTGTGCCGG AAAGCCAAGA CTAA
 
Protein sequence
MFGKKFTFTR SASPALSFIA EGTKLTGNME FTGDVLIGGE VQGQILSQAN VIVERTGKLH 
SEVKCRELII DGYFKGRLIC ERLVIQGHGI VDGDVACTSM QISEGGQFIG LRIKEDHQTI
HAHPLPSPGS ANVLLSTSAS LVPESQD