Gene Shewana3_2772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2772 
Symbol 
ID4479759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3311879 
End bp3312820 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content49% 
IMG OID639727378 
Producthomoserine O-succinyltransferase 
Protein accessionYP_870405 
Protein GI117921213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00163618 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGTTA AAATTCCAGA TCATCTGCCT GCAGCAGGGA TTTTAGAATC TGAAAATATT 
TTCGTAATGT CCGAGACCCG GGCTGCCAAT CAAGACATCA GACCGATGAA GGTGCTGATC
CTGAATCTGA TGCCCAATAA AATCGAGACA GAAACCCAGC TTCTACGCCT ATTAGGTAAC
ACGCCTTTGC AGGTGGATGT CGATTTACTG CGTATTCATG ATAAAGAGTC GAAGCACACC
TCAATTGATC ATATGAACAC CTTCTACCGT GATTTTGAGG ACGTGCGCCA TAAAAACTAC
GACGGCCTGA TCATCACGGG CGCGCCCCTT GGGCAAATCG ATTTCGAAGA GGTTACTTAC
TGGGATCATA TCCGCGAGAT TATCGATTGG TCACAGCAGC ATGTTACGTC AGTGCTATTC
CTCTGCTGGG CGGCGCACGC TGGGCTTTAT CATCTCTACG GCTTAAATCG GAAAATCCTG
CAGCAAAAGC GTTCTGGGGT GTTTGTGCAT CGCCGCACCT GCCAACATTT CCCGCTGCTG
CGCGGATTCG ATGATGAGTT CTTTGCGCCG CATTCCCGCT TTGCCGAGAT GGATATCGAG
GAACTTAAAC AGCATTCTGA GCTGCAGGTA CTGGCACAAT CCGATGAGGC AGGAGCCTAC
TTAGTCCTCA GTCGTAACAA TCGCAACCTG TTTGTGATGG GGCACCCCGA ATACCAAAAA
TCTACCTTAA ACGATGAATA TCATCGGGAT TTAGCGCAGG GATTAAATCC CAATGTGCCG
CAAAACTATT ATCGTAACGA CGATCCCAAG GACGATGCCA TTGCCCGTTG GCATAGTCAT
GGCAGCCTGC TCGTCAGCAA CTGGCTCAAC TATTACGTTT ACCAATTAAC GCCCTATGAC
TTAAGCGATA TGTCTGCTGT CACGCCGTGG GAATCGCAGT AG
 
Protein sequence
MPVKIPDHLP AAGILESENI FVMSETRAAN QDIRPMKVLI LNLMPNKIET ETQLLRLLGN 
TPLQVDVDLL RIHDKESKHT SIDHMNTFYR DFEDVRHKNY DGLIITGAPL GQIDFEEVTY
WDHIREIIDW SQQHVTSVLF LCWAAHAGLY HLYGLNRKIL QQKRSGVFVH RRTCQHFPLL
RGFDDEFFAP HSRFAEMDIE ELKQHSELQV LAQSDEAGAY LVLSRNNRNL FVMGHPEYQK
STLNDEYHRD LAQGLNPNVP QNYYRNDDPK DDAIARWHSH GSLLVSNWLN YYVYQLTPYD
LSDMSAVTPW ESQ