Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2772 |
Symbol | |
ID | 4479759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3311879 |
End bp | 3312820 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727378 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_870405 |
Protein GI | 117921213 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00163618 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGTTA AAATTCCAGA TCATCTGCCT GCAGCAGGGA TTTTAGAATC TGAAAATATT TTCGTAATGT CCGAGACCCG GGCTGCCAAT CAAGACATCA GACCGATGAA GGTGCTGATC CTGAATCTGA TGCCCAATAA AATCGAGACA GAAACCCAGC TTCTACGCCT ATTAGGTAAC ACGCCTTTGC AGGTGGATGT CGATTTACTG CGTATTCATG ATAAAGAGTC GAAGCACACC TCAATTGATC ATATGAACAC CTTCTACCGT GATTTTGAGG ACGTGCGCCA TAAAAACTAC GACGGCCTGA TCATCACGGG CGCGCCCCTT GGGCAAATCG ATTTCGAAGA GGTTACTTAC TGGGATCATA TCCGCGAGAT TATCGATTGG TCACAGCAGC ATGTTACGTC AGTGCTATTC CTCTGCTGGG CGGCGCACGC TGGGCTTTAT CATCTCTACG GCTTAAATCG GAAAATCCTG CAGCAAAAGC GTTCTGGGGT GTTTGTGCAT CGCCGCACCT GCCAACATTT CCCGCTGCTG CGCGGATTCG ATGATGAGTT CTTTGCGCCG CATTCCCGCT TTGCCGAGAT GGATATCGAG GAACTTAAAC AGCATTCTGA GCTGCAGGTA CTGGCACAAT CCGATGAGGC AGGAGCCTAC TTAGTCCTCA GTCGTAACAA TCGCAACCTG TTTGTGATGG GGCACCCCGA ATACCAAAAA TCTACCTTAA ACGATGAATA TCATCGGGAT TTAGCGCAGG GATTAAATCC CAATGTGCCG CAAAACTATT ATCGTAACGA CGATCCCAAG GACGATGCCA TTGCCCGTTG GCATAGTCAT GGCAGCCTGC TCGTCAGCAA CTGGCTCAAC TATTACGTTT ACCAATTAAC GCCCTATGAC TTAAGCGATA TGTCTGCTGT CACGCCGTGG GAATCGCAGT AG
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Protein sequence | MPVKIPDHLP AAGILESENI FVMSETRAAN QDIRPMKVLI LNLMPNKIET ETQLLRLLGN TPLQVDVDLL RIHDKESKHT SIDHMNTFYR DFEDVRHKNY DGLIITGAPL GQIDFEEVTY WDHIREIIDW SQQHVTSVLF LCWAAHAGLY HLYGLNRKIL QQKRSGVFVH RRTCQHFPLL RGFDDEFFAP HSRFAEMDIE ELKQHSELQV LAQSDEAGAY LVLSRNNRNL FVMGHPEYQK STLNDEYHRD LAQGLNPNVP QNYYRNDDPK DDAIARWHSH GSLLVSNWLN YYVYQLTPYD LSDMSAVTPW ESQ
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