Gene Shewana3_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2749 
Symbol 
ID4478234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3280781 
End bp3281821 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content57% 
IMG OID639727355 
ProductABC transporter related 
Protein accessionYP_870382 
Protein GI117921190 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTC AACAGGCTAC AGCAGGGATA TCAGTCGCAG GGACATCAGC GGCAGAAACA 
TCAAGCGCGA CTCCTGAATT TGCTATCGAA ACCCGCGGTA TGACCCGCGC TTTTGGCGGC
ATCAATGCGG TCGAAGACCT TGATTTGGCG ATCCCTAAGG GCACGATTTA TGGGTTTTTA
GGCCCCAATG GCTGTGGCAA ATCGACCTCC ATTCGAATGT TGACTGGGCT GCTCAGCCCA
ACCTCAGGGG ATATTCGGGT GCTGGGGGAA ACCTTGCCCG GCGCCGAGGA AAAACTGCGC
CGCCGCATTG GCTATATGAC GCAAAAATTC TCCCTCTACG ACAACCTGTC GGTGCGGGAA
AACCTCGAGT TTGTGGCGCA AATTTATGGG CTGAATCGTC GCCAAACCAA GGCGCGTTTG
GCCGAACTAT TAAGCTTGTA CGATTTGGCG GGGCGCGAGA AGCAAATGGC GGGCTCCATG
AGTGGCGGGC AAAAGCAACG TTTAGCTTTG GCCGCCGCGA CCTTGCATCA CCCCGAGCTG
TTATTTCTCG ATGAGCCAAC ATCGGCGGTC GACCCTGAAA ATCGCCGCGA GTTTTGGGAG
CGGCTGTTCG ATCTCTGCGC CCAAGGCACC ACGATTTTAG TCTCGACCCA CTATATGGAT
GAGGCAGAGC GTTGCCATGG ATTAGCGATT TTAGAGCGTG GGATAAAACG CGCCGACGGC
TCGCCGCAAC AATTAATGGC GGCCATGGGC GCGCGGGTCG TTGAAGTGTC GGGGGAGGAT
TTACGCAAGC TTAAACAGTC ACTCATTAGC GACGCCAACG TGTTATCGGC GGCGCAGATT
GGCAGTCGTT TACGGGTATT AGTGCAAAGT TCGATTGCAG ATCCGCTGGC CTGGTTAAGC
CCAAGGGTCG CGGGGCGGGC ATTGACCGAA GTGCGCCCCA GCCTTGAGGA TGTGTTTGTC
ACCTGCACGG GTGGGCGTGC CCAGCTAACG CCGCCAAACG GCAGTCAGGC CACTACCGTG
GAGGCTCAAG ATGCTACGTA G
 
Protein sequence
MSAQQATAGI SVAGTSAAET SSATPEFAIE TRGMTRAFGG INAVEDLDLA IPKGTIYGFL 
GPNGCGKSTS IRMLTGLLSP TSGDIRVLGE TLPGAEEKLR RRIGYMTQKF SLYDNLSVRE
NLEFVAQIYG LNRRQTKARL AELLSLYDLA GREKQMAGSM SGGQKQRLAL AAATLHHPEL
LFLDEPTSAV DPENRREFWE RLFDLCAQGT TILVSTHYMD EAERCHGLAI LERGIKRADG
SPQQLMAAMG ARVVEVSGED LRKLKQSLIS DANVLSAAQI GSRLRVLVQS SIADPLAWLS
PRVAGRALTE VRPSLEDVFV TCTGGRAQLT PPNGSQATTV EAQDAT