Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2731 |
Symbol | |
ID | 4479135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3261151 |
End bp | 3261861 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727337 |
Product | transcriptional regulator PhoU |
Protein accession | YP_870364 |
Protein GI | 117921172 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATA TGAATTTAAA CAAACATATC TCTGGGCAAT TTAACGCCGA GTTAGATGAT ATCCGTAACC GCGTACTCGC CATGGGTGGC TTGGTTGAGC GTCAGTTAGA GCAAGCCATC GACGCCTTAA GCACCTTAGA TGCCGAATTA GCGCAAAAGG TGATCACCGG CGATCACAAA GTGAATGGCA TGGAAGTCTC GATTGACGAA GAATGCACCC GCATTATCGC CAAACGCCAA CCGGCAGCGA GCGACTTACG GCTAATTATC GCGATTTCAA AATCGATTGC CGATCTTGAG CGTATCGGTG ATGCCTGTGT GCGTATCGCC AAGGCTGCAT TAGATAAGCG TTTGAATAAT CAGCAGCCAT TATTAGTCAG CATTGAAAAC ATGGGCCGCC ATGCGATTCG TATGCTGCAC GCAACGCTCG ATGCCTTAGC CCGTATGGAT GCCGATTCGG CGTTGGAGCT TCACAAAGAA GATGCCAAGC TCGACCGTGA ATACGAAGGC ATTATCCGTC AATTAATGAC CTACATGATG GAAGACCCAC GCTCAATCCC CGATGTATTA GACGTACTCT GGGCTGCCCG TGCGGTTGAG CGTGTCGGCG ATCGTTGTAA AAATATCTGC GAATACATTA TTTACTACGT AAAAGGTAAA GACGTTCGCC ATACTTCCTA CGAAGATATG GAAAAGGATT TAAAGGACTA A
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Protein sequence | MENMNLNKHI SGQFNAELDD IRNRVLAMGG LVERQLEQAI DALSTLDAEL AQKVITGDHK VNGMEVSIDE ECTRIIAKRQ PAASDLRLII AISKSIADLE RIGDACVRIA KAALDKRLNN QQPLLVSIEN MGRHAIRMLH ATLDALARMD ADSALELHKE DAKLDREYEG IIRQLMTYMM EDPRSIPDVL DVLWAARAVE RVGDRCKNIC EYIIYYVKGK DVRHTSYEDM EKDLKD
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