Gene Shewana3_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2715 
Symbol 
ID4479119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3245612 
End bp3246661 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content53% 
IMG OID639727321 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_870348 
Protein GI117921156 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATT CCCGCGTATT TATTAATAGC CTTGCCTATG AACTGGCACC TGTGGTGGTT 
TCCAGTAGTG AGCTAGAATC TCGCCTCGCG CCTCTATATC AAAAATTTCG CATTCCTATG
GGGCAACTTG CGGCGTTAAC GGGCATTACC GAACGCCGTT GGTGGCCTAA AGGGCATCAA
TTATCCGATG GAGCGATTAA AGCGGCGCAC AAGGCGATAG CAGAAACGGG AATAGAAGTC
GCCGAACTGG GCGCAGTGGT GTACACCGGC GTTTGCCGTG ATCAGCACGA ACCCGCCACT
GCCTGTCGGA TTGCGGCGGC CTTAGGTGTG TCGAAGGACA CGGCGATTTA CGATATCAGC
AATGCCTGTC TTGGGGTGTT ATCGGGCATT TTAGACATTG CCAACCGTAT CGAGCTTGGC
CAAATTAAGG CGGGCATGGT GGTGTCCTGC GAATCGGCGC GGGATATTGT CGATGTGACC
ATTGATAATA TGCTGGCCGA CCCGACCATG CAGAATTTTG CTCAGTCGCT GGCGACCTTA
ACCGGCGGCT CTGGCGCGGT GGCGGTGATC CTGACCGATG GCAGTTTACC GCTGACGAAT
GTGCGTAAGC ATCAGCTGCT TGGCGCCTCC CATTTATCTG CGCCGCAGCA TCACCAACTG
TGTCAGTGGG GCTTACAGGA AGTAGGGCAC AATATTTACC GTGAGTTTAT GCGTACCGAT
GCGGTGACCT TACTCAAAGA AGGGGTCGAG CTGGCGAAGC ATACGTGGGA GCATTTCCTC
GCTCAGCGAA ATTGGTTGGT CGAGCAGGTC GACAAAGTGA TCTGCCATCA GGTCGGCGCT
TCAAACCGCA AACAGGTCTT GAGTGCGTTA AACATTCCGC CTGAAAAAGA ATTCCCAACA
TATCAACTGC TTGGCAATAT GGGCACAGTC TCTTTACCCG TCACTGCGGC CATGGCACAT
GATCAAGGCT TTTTACGCCC TGGGGATCAG GTGAGCTTTT TAGGTATCGG CAGTGGTTTG
AACTGCATGA TGCTGGGTAT TAAGTGGTAG
 
Protein sequence
MKYSRVFINS LAYELAPVVV SSSELESRLA PLYQKFRIPM GQLAALTGIT ERRWWPKGHQ 
LSDGAIKAAH KAIAETGIEV AELGAVVYTG VCRDQHEPAT ACRIAAALGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGMVVSC ESARDIVDVT IDNMLADPTM QNFAQSLATL
TGGSGAVAVI LTDGSLPLTN VRKHQLLGAS HLSAPQHHQL CQWGLQEVGH NIYREFMRTD
AVTLLKEGVE LAKHTWEHFL AQRNWLVEQV DKVICHQVGA SNRKQVLSAL NIPPEKEFPT
YQLLGNMGTV SLPVTAAMAH DQGFLRPGDQ VSFLGIGSGL NCMMLGIKW